r-bioc-rtracklayer 1.34.1-1 / usr / share / doc / r-bioc-rtracklayer / copyright

Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: rtracklayer
Upstream-Contact: Michael Lawrence <michafla@gene.com> 
Source: https://bioconductor.org/packages/rtracklayer/

Files: *
Copyright: © 2006-2016 Michael Lawrence, Vince Carey, Robert Gentleman 
License: Artistic-2.0

Files: src/ucsc/*
Copyright: 2011-2014 The Regents of the University of California
License: all_use_kentlib
 *** TEXT FROM ORIGINAL KENT SOURCE LIB README ***
 This directory contains general purpose, web oriented,
 and computational biology oriented modules,  as well
 as some less general stuff associated with the Intronerator
 web site.  Initially this library was created by Jim
 Kent from 1999 to 2001.  Since then other programmers have
 also added to it.  Jim continues to make substantial
 contributions.
 .
 With the exception of the gifcomp.c module, all 
 modules here are free for all use - public, private,
 or commercial. The gifcomp.c module contains code
 originally distributed by CompuServe under a similar
 "free for all" license.  However this uses the LZW
 patented by UniSys, which UniSys started enforcing
 several years after CompuServe released this module.
 The last I heard UniSys did not require a license
 for non-commercial purposes, but did require a
 license for commercial purposes. This may change
 in the future, though the patent is nearing it's
 expiration date in any case.  Commercial users
 are advised to either get a license for LZW, or
 to switch from GIF to PNG.

Files: src/ucsc/bits.*
       src/ucsc/common.*
       src/ucsc/dlist.* 
       src/ucsc/dnaseq.* 
       src/ucsc/dnautil.* 
       src/ucsc/dystring.* 
       src/ucsc/errAbort.* 
       src/ucsc/hash.* 
       src/ucsc/hmmstats.c
       src/ucsc/htmshell.h
       src/ucsc/linefile.*
       src/ucsc/localmem.*
       src/ucsc/memalloc.*
       src/ucsc/net.*
       src/ucsc/obscure.*
       src/ucsc/options.h
       src/ucsc/os*x.c
       src/ucsc/portable.h
       src/ucsc/sqlNum.*
       src/ucsc/wildcmp.c
       src/ucsc/cheapcgi.h
       src/ucsc/hmmstats.h
       src/ucsc/portimpl.h
       src/ucsc/sig.h
Copyright: 2000-2005 Jim Kent
License: all_use
 license is hereby granted for all use - public, private or commercial
Comment: The files
       src/ucsc/cheapcgi.h
       src/ucsc/hmmstats.h
       src/ucsc/portimpl.h
       src/ucsc/sig.h
 in this source download do contain the statement:
    Source code may be freely used
    for personal, academic, and non-profit purposes.  Commercial use
    permitted only by explicit agreement with Jim Kent (jim_kent@pacbell.net)
 but the author Jim Kent declared publicly here
    https://lists.alioth.debian.org/pipermail/debian-med-packaging/2016-May/042035.html
 that this is not the proper license but the license above applies.

Files: debian/*
Copyright: 2013-2016 Andreas Tille <tille@debian.org>
License: Artistic-2.0

License: Artistic-2.0
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