/usr/lib/python2.7/dist-packages/ngs/LibChecker.py is in python-ngs 1.3.0-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 | # ===========================================================================
#
# PUBLIC DOMAIN NOTICE
# National Center for Biotechnology Information
#
# This software/database is a "United States Government Work" under the
# terms of the United States Copyright Act. It was written as part of
# the author's official duties as a United States Government employee and
# thus cannot be copyrighted. This software/database is freely available
# to the public for use. The National Library of Medicine and the U.S.
# Government have not placed any restriction on its use or reproduction.
#
# Although all reasonable efforts have been taken to ensure the accuracy
# and reliability of the software and data, the NLM and the U.S.
# Government do not and cannot warrant the performance or results that
# may be obtained by using this software or data. The NLM and the U.S.
# Government disclaim all warranties, express or implied, including
# warranties of performance, merchantability or fitness for any particular
# purpose.
#
# Please cite the author in any work or product based on this material.
#
# ===========================================================================
#
#
def check_versions():
from ctypes import POINTER, c_char_p, c_void_p, c_size_t, c_char
from . LibManager import LibManager, load_library, should_download_library, version_tuple
from . LibManager import get_library_version_tuple_remote, load_updated_library
from . import NGS
if not should_download_library():
return 0
libname_engine = "ncbi-vdb"
libname_sdk = "ngs-sdk"
NGS.lib_manager.c_lib_engine = load_library(libname_engine, do_download=False, silent=True)
NGS.lib_manager.c_lib_sdk = load_library(libname_sdk, do_download=False, silent=True)
ret = 0
if NGS.lib_manager.c_lib_engine is None:
ret = ret | 1
else:
try:
NGS.lib_manager._bind(NGS.lib_manager.c_lib_engine, "PY_NGS_Engine_GetVersion", [POINTER(c_char_p), POINTER(c_char), c_size_t], None)
except AttributeError:
NGS.lib_manager.setattr("PY_NGS_Engine_GetVersion", None)
if version_tuple( NGS.getVersion_impl() ) < get_library_version_tuple_remote(libname_engine):
ret = ret | 1
if NGS.lib_manager.c_lib_sdk is None:
ret = ret | 2
else:
try:
NGS.lib_manager.bind_sdk("PY_NGS_PackageGetPackageVersion", [POINTER(c_void_p), POINTER(c_void_p)])
# Functions needed to make a call to NGS version functions
NGS.lib_manager._bind(NGS.lib_manager.c_lib_sdk, "PY_NGS_RawStringRelease", [c_void_p, POINTER(c_void_p)], None)
except AttributeError:
NGS.lib_manager.setattr("PY_NGS_PackageGetPackageVersion", None)
if version_tuple( NGS.getPackageVersion_impl() ) < get_library_version_tuple_remote(libname_sdk):
ret = ret | 2
return ret
|