About

This package is 515.9 KB. It is available at http://ftp.debian.org/debian/pool/main/p/parsnp/parsnp_1.2+dfsg-3_amd64.deb .

View its full control file here: debian/control.

Description

rapid core genome multi-alignment

Relations

This package depends on: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libgomp1 (>= 4.9), libmuscle-3.7-1, libstdc++6 (>= 5.2), python:any (>= 2.7), python-numpy, fasttree, mummer, phipack.

This package recommends: python-dendropy.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

parsnp 1.2+dfsg-3 is in debian - stretch / main. This package's architecture is: amd64.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 181 bytes
prerm text/x-shellscript N/A N/A 249 bytes
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/parsnp root:root 0o777
/usr/lib/ root:root 0o755
/usr/lib/parsnp/ root:root 0o755
/usr/lib/parsnp/parsnp application/x-sharedlib root:root 0o755 310.2 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/parsnp/ root:root 0o755
/usr/share/doc/parsnp/changelog.Debian.gz application/gzip root:root 0o644 479 bytes
/usr/share/doc/parsnp/copyright text/plain root:root 0o644 2.0 KB
/usr/share/doc/parsnp/examples/ root:root 0o755
/usr/share/doc/parsnp/examples/mers_virus/ root:root 0o755
/usr/share/doc/parsnp/examples/mers_virus/genomes/ root:root 0o755
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_1_2013.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_12_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_15_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_16_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_17_2013.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_18_2013.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_19_2013.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_21_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_2_2013.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_25_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_3_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_4_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Bisha_1_2012.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Buraidah_1_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/EMC_2012.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/England1.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/England-Qatar_2012.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/FRA-UAE.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Hafr-Al-Batin_1_2013.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Hafr-Al-Batin_2_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Hafr-Al_Batin_6_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Indiana-USA-1_Saudi_Arabia_2014.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Jeddah_1_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Jeddah_2014_C7149.fna.gz application/gzip root:root 0o644 9.5 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Jeddah_2014_C7569.fna.gz application/gzip root:root 0o644 9.4 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Jeddah_2014_C7770.fna.gz application/gzip root:root 0o644 9.4 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Jordan-N3_2012.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KF192507.1.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KFU-HKU_13.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KFU-HKU_19Dam.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KFU-HKU_1.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KJ477102.1.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-363.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-376.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-378.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-503.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-505.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/NC_019843.2.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Qatar3.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Qatar4.fna.gz application/gzip root:root 0o644 9.7 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_1_2012.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_14_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_2_2012.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_3_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_4_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_5_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_9_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Taif_1_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/genomes/Wadi-Ad-Dawasir_1_2013.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/ref/ root:root 0o755
/usr/share/doc/parsnp/examples/mers_virus/ref/England1.fna.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/parsnp/examples/mers_virus/ref/England1.gbk.gz application/gzip root:root 0o644 20.6 KB
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/parsnp.1.gz application/gzip root:root 0o644 1.4 KB
/usr/share/parsnp/ root:root 0o755
/usr/share/parsnp/Parsnp.py text/plain root:root 0o755 47.7 KB
/usr/share/parsnp/template.ini text/plain root:root 0o644 395 bytes
/usr/share/python/ root:root 0o755
/usr/share/python/runtime.d/ root:root 0o755
/usr/share/python/runtime.d/parsnp.rtupdate text/x-shellscript root:root 0o755 133 bytes