/usr/include/trilinos/Zoltan2_AlgDefaultMapping.hpp is in libtrilinos-zoltan2-dev 12.10.1-3.
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//
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//
// Zoltan2: A package of combinatorial algorithms for scientific computing
// Copyright 2012 Sandia Corporation
//
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// @HEADER
#ifndef _ZOLTAN2_ALGDEFAULTMAPPING_HPP_
#define _ZOLTAN2_ALGDEFAULTMAPPING_HPP_
#include <Zoltan2_Standards.hpp>
#include <Zoltan2_Algorithm.hpp>
#include <Zoltan2_PartitioningSolution.hpp>
#include <Zoltan2_Util.hpp>
//////////////////////////////////////////////////////////////////////////////
//! \file Zoltan2_AlgDefaultMapping.hpp
//! \brief Define a default mapping of parts to processors
//
//////////////////////////////////////////////////////////////////////////////
namespace Zoltan2 {
template <typename Adapter, typename MachineRep>
class AlgDefaultMapping : public Algorithm<Adapter>
{
private:
typedef typename Adapter::lno_t lno_t;
typedef typename Adapter::gno_t gno_t;
typedef typename Adapter::scalar_t scalar_t;
typedef typename Adapter::part_t part_t;
typedef typename Adapter::user_t user_t;
typedef typename Adapter::userCoord_t userCoord_t;
const RCP<const Environment> env;
const RCP<const Comm<int> > problemComm;
const RCP<const typename Adapter::base_adapter_t> adapter;
public:
/*! Constructor
* \param env parameters for the problem and library configuration
* \param problemComm the communicator for the problem
* \param adapter the user's input adapter
*/
AlgDefaultMapping(
const Teuchos::RCP <const Teuchos::Comm<int> > &comm_,
const Teuchos::RCP <const MachineRep> &machine_,
const Teuchos::RCP <const Adapter> &adapter_,
const Teuchos::RCP <const Zoltan2::PartitioningSolution<Adapter> > &psoln_,
const Teuchos::RCP <const Environment> &envConst)
: env(envConst), adapter(adapter_),
partIsRank(false), haveContiguousParts(false)
rankForPart(Teuchos::null)
{
int nRanks = comm->getSize();
// Get set of parts from partitioning solution or adapter, if provided
// Otherwise, we'll assume set of parts == set of ranks
const *partList;
if (psoln_ != Teuchos::null) {
partList = psoln_->getPartListView();
}
else {
adapter->getPartsView(partList);
}
// Compute maxPart, nParts
typedef typename Tpetra::Map<lno_t, part_t> tpetraMap_t
Teuchos::RCP<tpetraMap_t> tmap;
part_t minPart, maxPart;
if (partList == NULL) {
// Parts for IDs are the same as ranks
nParts = nRanks;
maxPart = nRanks-1;
minPart = 0;
}
else {
// Parts were provided by partitioning solution or input adapter
// Find unique parts on this rank,
// as Tpetra::Map does not like duplicate GIDs within a rank
size_t nLocal = adapter->getLocalNumIDs();
std::set<part_t> unique(nLocal);
for (size_t i; i < adapter->getLocalNumIDs(); i++)
unique.insert(partList[i]);
size_t nUnique = unique.size();
Array<const part_t> uniquePartList(nUnique);
size_t k = 0;
for (typename std::set<part_t>::iterator it = set.begin();
it != set.end(); it++)
uniquePartList[k++] = *it;
// Use Tpetra::Map to find the max, min, total part.
global_size_t nGlobalElts =
Teuchos::OrdinalTraits<Tpetra::global_size_t>::invalid();
tmap = rcp(new tpetraMap_t(nGlobalElts, uniquePartList(), 0, comm));
nParts = as<part_t>(tmap->getGlobalNumElements());
minPart = tmap->getMinAllGlobalIndex();
maxPart = tmap->getMaxAllGlobalIndex();
}
nParts_Div_nRanks = nParts / nRanks;
nParts_Mod_nRanks = nParts % nRanks;
// Determine number of unique parts, as well as min and max part
// Can probably use a Tpetra Map.
if (maxPart < nRanks)
partIsRank = true; // Most common case
if ((minPart == 0) && (maxPart == nParts-1))
// Have a contiguous set of parts; can use simplest default mapping
haveContiguousParts = true;
if (!partIsRank && !haveContiguousParts) {
// Use Tpetra createOneToOne to map parts to ranks
Teuchos::RCP<tpetraMap_t> oneToOneMap = Tpetra::createOneToOne(tmap);
// Each rank needs names of all parts
// Should we gather map to one rank, or copy to all?
// I don't know how to do it.
Teuchos::RCP<tpetraMap_t> gatheredMap = ;
Teuchos::ArrayView<const part_t> allParts =
gatheredMap->getNodeElementList();
// Look up the rank for all parts assigned by oneToOneMap
Teuchos::Array<int> allRanks(allParts.size());
oneToOneMap->getRemoveIndexList(allParts, allRanks());
for (size_t i = 0; i < allPart.size())
(*rankForPart)[allParts[i]] = allRanks[i];
}
}
void map(Teuchos::RCP<MappingSolution<Adapter> > msoln) {
// Mapping was computed in constructor;
// nothing to do here since we implement getRankForPart and
// getMyPartsView. (If we didn't we would need to store
// the mapping in the soln here.)
}
int getRankForPart(part_t p) {
if (p < 0 || p > maxPart)
throw std::runtime_error("Invalid part in getRankForPart");
// Most common case: at most one part per rank
if (partIsRank)
return as<int>(p);
// Multiple parts per rank
if (haveContiguousParts) {
int tmp = p / nParts_Div_nRanks;
while (firstContiguousPart(tmp) > p) tmp--;
while (firstContiguousPart(tmp+1) < p) tmp++;
return tmp;
}
// None of the simple schemes apply; use the unordered_map.
return rankForPart[p];
}
void getMyPartsView(part_t &numParts, part_t *&parts)
{
// Will need to construct the arrays if this function is called.
// Will not work if this is a const method.
partsForRankIdx = rcp(new part_t[nRanks+1]);
partsForRank = rcp(new part_t[nParts]);
}
void map(const RCP<PartitioningSolution<Adapter> > &solution);
private:
inline part_t firstContiguousPart(int rank) {
// For contiguous part assignments, the first part assigned to rank
return (rank * nParts_Div_nRanks + min(rank, nParts_Mod_nRanks));
}
bool partIsRank;
bool haveContiguousParts;
Teuchos::RCP<rankForPart_t> rankForPart;
};
} // namespace Zoltan2
#endif
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