This file is indexed.

/usr/include/trilinos/Thyra_DefaultSpmdMultiVector_decl.hpp is in libtrilinos-thyra-dev 12.10.1-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
// @HEADER
// ***********************************************************************
// 
//    Thyra: Interfaces and Support for Abstract Numerical Algorithms
//                 Copyright (2004) Sandia Corporation
// 
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
// 
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Roscoe A. Bartlett (bartlettra@ornl.gov) 
// 
// ***********************************************************************
// @HEADER

#ifndef THYRA_Spmd_MULTI_VECTOR_STD_DECL_HPP
#define THYRA_Spmd_MULTI_VECTOR_STD_DECL_HPP

#include "Thyra_SpmdMultiVectorDefaultBase_decl.hpp"


namespace Thyra {


/** \brief Efficient concrete implementation subclass for SPMD multi-vectors.
 *
 * This subclass provides a very efficient and very general concrete
 * implementation of a <tt>Thyra::MultiVectorBase</tt> object.
 *
 * Objects of this type generally should not be constructed directly by a
 * client but instead by using the concrete vector space subclass
 * <tt>Thyra::DefaultSpmdVectorSpace</tt> and using the function
 * <tt>Thyra::createMembers()</tt>.
 *
 * The storage type can be anything since a <tt>Teuchos::ArrayRCP</tt> is used
 * to pass in the local values pointer into the constructor and
 * <tt>initialize()</tt>.
 *
 * \ingroup Thyra_Op_Vec_adapters_Spmd_concrete_std_grp
 */
template<class Scalar>
class DefaultSpmdMultiVector : virtual public SpmdMultiVectorDefaultBase<Scalar> {
public:

  /** @name Constructors/initializers/accessors */
  //@{

  /// Construct to uninitialized
  DefaultSpmdMultiVector();

  /// Calls <tt>initialize()</tt>
  DefaultSpmdMultiVector(
    const RCP<const SpmdVectorSpaceBase<Scalar> > &spmdRangeSpace,
    const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace
    );

  /// Calls <tt>initialize()</tt>
  DefaultSpmdMultiVector(
    const RCP<const SpmdVectorSpaceBase<Scalar> > &spmdRangeSpace,
    const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
    const ArrayRCP<Scalar> &localValues,
    const Ordinal leadingDim = -1
    );

  /** \brief Initialize only with vector spaces where storage is allocated
   * internally..
   *
   * \param spmdRangeSpace [in] Smart pointer to <tt>SpmdVectorSpaceBase</tt>
   * object that defines the data distribution for <tt>spmdSpace()</tt> and
   * <tt>range()</tt>.
   *
   * \param domainSpace [in] Smart pointer to <tt>VectorSpaceBase</tt> object
   * that defines <tt>domain()</tt> space.
   *
   * <b>Preconditions:</b><ul>
   * <li><tt>spmdRangeSpace.get()!=NULL</tt>
   * <li><tt>domainSpace.get()!=NULL</tt>
   * </ul>
   */
  void initialize(
    const RCP<const SpmdVectorSpaceBase<Scalar> > &spmdRangeSpace,
    const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace
    );

  /** \brief Initialize using externally allocated storage.
   *
   * \param spmdRangeSpace [in] Smart pointer to <tt>SpmdVectorSpaceBase</tt>
   * object that defines the data distribution for <tt>spmdSpace()</tt> and
   * <tt>range()</tt>.
   *
   * \param domainSpace [in] Smart pointer to <tt>VectorSpaceBase</tt> object
   * that defines <tt>domain()</tt> space.
   *
   * \param localValues [in] Smart pointer to beginning of Fortran-style
   * column-major array that defines the local localValues in the
   * multi-vector.  This array must be at least of dimension
   * <tt>spmdRangeSpace->localSubDim()*domainSpace->dim()</tt> and
   * <tt>(&*localValues)[ i + j*leadingDim ]</tt> gives the local value of the
   * zero-based entry <tt>(i,j)</tt> where
   * <tt>i=0...spmdSpace()->localSubDim()-1</tt> and
   * <tt>j=0...domainSpace->dim()-1</tt>.
   *
   * \param leadingDim [in] The leading dimension of the multi-vector.  If -1,
   * then is taken to be spmdRangeSpace->localSubDim().
   *
   * <b>Preconditions:</b><ul>
   * <li><tt>spmdRangeSpace.get()!=NULL</tt>
   * <li><tt>domainSpace.get()!=NULL</tt>
   * <li><tt>localValues.get()!=NULL</tt>
   * <li><tt>leadingDim >= spmdRangeSpace->localSubDim()</tt>
   * </ul>
   */
  void initialize(
    const RCP<const SpmdVectorSpaceBase<Scalar> > &spmdRangeSpace,
    const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
    const ArrayRCP<Scalar> &localValues,
    const Ordinal leadingDim = -1
    );

  /** \brief Set to an uninitialized state.
   *
   * <b>Postconditions:</b><ul>
   * <li><tt>this->spmdSpace().get() == NULL</tt>.
   */
  void uninitialize(
    RCP<const SpmdVectorSpaceBase<Scalar> > *spmdRangeSpace = NULL,
    RCP<const ScalarProdVectorSpaceBase<Scalar> > *domainSpace = NULL,
    ArrayRCP<Scalar> *localValues = NULL,
    Ordinal *leadingDim = NULL
    );

  /** \brief . */
  RCP< const ScalarProdVectorSpaceBase<Scalar> >
  domainScalarProdVecSpc() const;

  //@}

protected:

  /** @name Overridden protected functions from MultiVectorBase */
  //@{
  /** \brief . */
  RCP<VectorBase<Scalar> > nonconstColImpl(Ordinal j);
  /** \brief . */
  RCP<const MultiVectorBase<Scalar> >
  contigSubViewImpl(const Range1D& colRng) const;
  /** \brief . */
  RCP<MultiVectorBase<Scalar> >
  nonconstContigSubViewImpl(const Range1D& colRng);
  /** \brief . */
  RCP<const MultiVectorBase<Scalar> >
  nonContigSubViewImpl(const ArrayView<const int> &cols) const;
  /** \brief . */
  RCP<MultiVectorBase<Scalar> >
  nonconstNonContigSubViewImpl(const ArrayView<const int> &cols);
  //@}

  /** @name Overridden protected functions from SpmdMultiVectorBase */
  //@{
  /** \brief . */
  RCP<const SpmdVectorSpaceBase<Scalar> > spmdSpaceImpl() const;
  /** \brief . */
  void getNonconstLocalMultiVectorDataImpl(
    const Ptr<ArrayRCP<Scalar> > &localValues, const Ptr<Ordinal> &leadingDim
    );
  /** \brief . */
  void getLocalMultiVectorDataImpl(
    const Ptr<ArrayRCP<const Scalar> > &localValues, const Ptr<Ordinal> &leadingDim
    ) const;
  //@}
  
private:
  
  // ///////////////////////////////////////
  // Private data members

  RCP<const SpmdVectorSpaceBase<Scalar> > spmdRangeSpace_;
  RCP<const ScalarProdVectorSpaceBase<Scalar> > domainSpace_;
  ArrayRCP<Scalar> localValues_;
  Ordinal leadingDim_;
  
  // ///////////////////////////////////////
  // Private member functions

  ArrayRCP<Scalar> createContiguousCopy(const ArrayView<const int> &cols) const;

public:

#ifdef THYRA_DEBUG
  // Unit testing sensing varaible
  static int numSkipCopyBack;
#endif
  
}; // end class DefaultSpmdMultiVector


template<class Scalar>
RCP<DefaultSpmdMultiVector<Scalar> >
defaultSpmdMultiVector(
  const RCP<const SpmdVectorSpaceBase<Scalar> > &spmdRangeSpace,
  const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
  const ArrayRCP<Scalar> &localValues,
  const Ordinal leadingDim = -1
  )
{
  return Teuchos::rcp(
    new DefaultSpmdMultiVector<Scalar>(
      spmdRangeSpace, domainSpace, localValues, leadingDim
      )
    );
}


} // end namespace Thyra


#endif // THYRA_Spmd_MULTI_VECTOR_STD_DECL_HPP