/usr/include/trilinos/Kokkos_DynamicView.hpp is in libtrilinos-kokkos-dev 12.10.1-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 | /*
//@HEADER
// ************************************************************************
//
// Kokkos v. 2.0
// Copyright (2014) Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact H. Carter Edwards (hcedwar@sandia.gov)
//
// ************************************************************************
//@HEADER
*/
#ifndef KOKKOS_DYNAMIC_VIEW_HPP
#define KOKKOS_DYNAMIC_VIEW_HPP
#include <cstdio>
#include <Kokkos_Core.hpp>
#include <impl/Kokkos_Error.hpp>
namespace Kokkos {
namespace Experimental {
/** \brief Dynamic views are restricted to rank-one and no layout.
* Subviews are not allowed.
*/
template< typename DataType , typename ... P >
class DynamicView : public Kokkos::ViewTraits< DataType , P ... >
{
public:
typedef ViewTraits< DataType , P ... > traits ;
private:
template< class , class ... > friend class DynamicView ;
typedef Kokkos::Experimental::Impl::SharedAllocationTracker track_type ;
static_assert( traits::rank == 1 && traits::rank_dynamic == 1
, "DynamicView must be rank-one" );
static_assert( std::is_trivial< typename traits::value_type >::value &&
std::is_same< typename traits::specialize , void >::value
, "DynamicView must have trivial data type" );
public:
typedef Kokkos::Experimental::MemoryPool< typename traits::device_type > memory_pool ;
private:
memory_pool m_pool ;
track_type m_track ;
typename traits::value_type ** m_chunks ;
unsigned m_chunk_shift ;
unsigned m_chunk_mask ;
unsigned m_chunk_max ;
public:
//----------------------------------------------------------------------
/** \brief Compatible view of array of scalar types */
typedef DynamicView< typename traits::data_type ,
typename traits::device_type >
array_type ;
/** \brief Compatible view of const data type */
typedef DynamicView< typename traits::const_data_type ,
typename traits::device_type >
const_type ;
/** \brief Compatible view of non-const data type */
typedef DynamicView< typename traits::non_const_data_type ,
typename traits::device_type >
non_const_type ;
/** \brief Must be accessible everywhere */
typedef DynamicView HostMirror ;
//----------------------------------------------------------------------
enum { Rank = 1 };
KOKKOS_INLINE_FUNCTION constexpr size_t size() const
{
return
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace
< Kokkos::Impl::ActiveExecutionMemorySpace
, typename traits::memory_space
>::value
? // Runtime size is at the end of the chunk pointer array
(*reinterpret_cast<const uintptr_t*>( m_chunks + m_chunk_max ))
<< m_chunk_shift
: 0 ;
}
template< typename iType >
KOKKOS_INLINE_FUNCTION constexpr
size_t extent( const iType & r ) const
{ return r == 0 ? size() : 1 ; }
template< typename iType >
KOKKOS_INLINE_FUNCTION constexpr
size_t extent_int( const iType & r ) const
{ return r == 0 ? size() : 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_0() const { return size(); }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_1() const { return 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_2() const { return 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_3() const { return 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_4() const { return 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_5() const { return 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_6() const { return 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t dimension_7() const { return 1 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_0() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_1() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_2() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_3() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_4() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_5() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_6() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr size_t stride_7() const { return 0 ; }
template< typename iType >
KOKKOS_INLINE_FUNCTION void stride( iType * const s ) const { *s = 0 ; }
//----------------------------------------------------------------------
// Range span is the span which contains all members.
typedef typename traits::value_type & reference_type ;
typedef typename traits::value_type * pointer_type ;
enum { reference_type_is_lvalue_reference = std::is_lvalue_reference< reference_type >::value };
KOKKOS_INLINE_FUNCTION constexpr bool span_is_contiguous() const { return false ; }
KOKKOS_INLINE_FUNCTION constexpr size_t span() const { return 0 ; }
KOKKOS_INLINE_FUNCTION constexpr pointer_type data() const { return 0 ; }
//----------------------------------------
template< typename I0 , class ... Args >
KOKKOS_INLINE_FUNCTION
reference_type operator()( const I0 & i0 , const Args & ... args ) const
{
static_assert( Kokkos::Impl::are_integral<I0,Args...>::value
, "Indices must be integral type" );
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace
< Kokkos::Impl::ActiveExecutionMemorySpace
, typename traits::memory_space
>::verify();
// Which chunk is being indexed.
const uintptr_t ic = uintptr_t( i0 >> m_chunk_shift );
typename traits::value_type * volatile * const ch = m_chunks + ic ;
// Do bounds checking if enabled or if the chunk pointer is zero.
// If not bounds checking then we assume a non-zero pointer is valid.
#if ! defined( KOKKOS_ENABLE_DEBUG_BOUNDS_CHECK )
if ( 0 == *ch )
#endif
{
// Verify that allocation of the requested chunk in in progress.
// The allocated chunk counter is m_chunks[ m_chunk_max ]
const uintptr_t n =
*reinterpret_cast<uintptr_t volatile *>( m_chunks + m_chunk_max );
if ( n <= ic ) {
Kokkos::abort("Kokkos::DynamicView array bounds error");
}
// Allocation of this chunk is in progress
// so wait for allocation to complete.
while ( 0 == *ch );
}
return (*ch)[ i0 & m_chunk_mask ];
}
//----------------------------------------
/** \brief Resizing in parallel only increases the array size,
* never decrease.
*/
KOKKOS_INLINE_FUNCTION
void resize_parallel( size_t n ) const
{
typedef typename traits::value_type value_type ;
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace
< Kokkos::Impl::ActiveExecutionMemorySpace
, typename traits::memory_space >::verify();
const uintptr_t NC = ( n + m_chunk_mask ) >> m_chunk_shift ;
if ( m_chunk_max < NC ) {
#if defined( KOKKOS_ENABLE_DEBUG_BOUNDS_CHECK )
printf("DynamicView::resize_parallel(%lu) m_chunk_max(%u) NC(%lu)\n"
, n , m_chunk_max , NC );
#endif
Kokkos::abort("DynamicView::resize_parallel exceeded maximum size");
}
typename traits::value_type * volatile * const ch = m_chunks ;
// The allocated chunk counter is m_chunks[ m_chunk_max ]
uintptr_t volatile * const pc =
reinterpret_cast<uintptr_t volatile*>( m_chunks + m_chunk_max );
// Potentially concurrent iteration of allocation to the required size.
for ( uintptr_t jc = *pc ; jc < NC ; ) {
// Claim the 'jc' chunk to-be-allocated index
const uintptr_t jc_try = jc ;
// Jump iteration to the chunk counter.
jc = atomic_compare_exchange( pc , jc_try , jc_try + 1 );
if ( jc_try == jc ) {
ch[jc_try] = reinterpret_cast<value_type*>(
m_pool.allocate( sizeof(value_type) << m_chunk_shift ));
Kokkos::memory_fence();
}
}
}
/** \brief Resizing in serial can grow or shrink the array size, */
inline
void resize_serial( size_t n )
{
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace
< Kokkos::Impl::ActiveExecutionMemorySpace
, typename traits::memory_space >::verify();
const uintptr_t NC = ( n + m_chunk_mask ) >> m_chunk_shift ;
if ( m_chunk_max < NC ) {
Kokkos::abort("DynamicView::resize_serial exceeded maximum size");
}
uintptr_t * const pc =
reinterpret_cast<uintptr_t*>( m_chunks + m_chunk_max );
if ( *pc < NC ) {
while ( *pc < NC ) {
m_chunks[*pc] =
m_pool.allocate( sizeof(traits::value_type) << m_chunk_shift );
++*pc ;
}
}
else {
while ( NC + 1 <= *pc ) {
--*pc ;
m_pool.deallocate( m_chunks[*pc]
, sizeof(traits::value_type) << m_chunk_shift );
m_chunks[*pc] = 0 ;
}
}
}
//----------------------------------------------------------------------
~DynamicView() = default ;
DynamicView() = default ;
DynamicView( DynamicView && ) = default ;
DynamicView( const DynamicView & ) = default ;
DynamicView & operator = ( DynamicView && ) = default ;
DynamicView & operator = ( const DynamicView & ) = default ;
template< class RT , class ... RP >
KOKKOS_INLINE_FUNCTION
DynamicView( const DynamicView<RT,RP...> & rhs )
: m_pool( rhs.m_pool )
, m_track( rhs.m_track )
, m_chunks( rhs.m_chunks )
, m_chunk_shift( rhs.m_chunk_shift )
, m_chunk_mask( rhs.m_chunk_mask )
, m_chunk_max( rhs.m_chunk_max )
{
}
//----------------------------------------------------------------------
struct Destroy {
memory_pool m_pool ;
typename traits::value_type ** m_chunks ;
unsigned m_chunk_max ;
bool m_destroy ;
// Initialize or destroy array of chunk pointers.
// Two entries beyond the max chunks are allocation counters.
KOKKOS_INLINE_FUNCTION
void operator()( unsigned i ) const
{
if ( m_destroy && i < m_chunk_max && 0 != m_chunks[i] ) {
m_pool.deallocate( m_chunks[i] , m_pool.get_min_block_size() );
}
m_chunks[i] = 0 ;
}
void execute( bool arg_destroy )
{
typedef Kokkos::RangePolicy< typename traits::execution_space > Range ;
m_destroy = arg_destroy ;
Kokkos::Impl::ParallelFor<Destroy,Range>
closure( *this , Range(0, m_chunk_max + 1) );
closure.execute();
traits::execution_space::fence();
}
void construct_shared_allocation()
{ execute( false ); }
void destroy_shared_allocation()
{ execute( true ); }
Destroy() = default ;
Destroy( Destroy && ) = default ;
Destroy( const Destroy & ) = default ;
Destroy & operator = ( Destroy && ) = default ;
Destroy & operator = ( const Destroy & ) = default ;
Destroy( const memory_pool & arg_pool
, typename traits::value_type ** arg_chunk
, const unsigned arg_chunk_max )
: m_pool( arg_pool )
, m_chunks( arg_chunk )
, m_chunk_max( arg_chunk_max )
, m_destroy( false )
{}
};
/**\brief Allocation constructor
*
* Memory is allocated in chunks from the memory pool.
* The chunk size conforms to the memory pool's chunk size.
* A maximum size is required in order to allocate a
* chunk-pointer array.
*/
explicit inline
DynamicView( const std::string & arg_label
, const memory_pool & arg_pool
, const size_t arg_size_max )
: m_pool( arg_pool )
, m_track()
, m_chunks(0)
// The memory pool chunk is guaranteed to be a power of two
, m_chunk_shift(
Kokkos::Impl::integral_power_of_two(
m_pool.get_min_block_size()/sizeof(typename traits::value_type)) )
, m_chunk_mask( ( 1 << m_chunk_shift ) - 1 )
, m_chunk_max( ( arg_size_max + m_chunk_mask ) >> m_chunk_shift )
{
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace
< Kokkos::Impl::ActiveExecutionMemorySpace
, typename traits::memory_space >::verify();
// A functor to deallocate all of the chunks upon final destruction
typedef typename traits::memory_space memory_space ;
typedef Kokkos::Experimental::Impl::SharedAllocationRecord< memory_space , Destroy > record_type ;
// Allocate chunk pointers and allocation counter
record_type * const record =
record_type::allocate( memory_space()
, arg_label
, ( sizeof(pointer_type) * ( m_chunk_max + 1 ) ) );
m_chunks = reinterpret_cast<pointer_type*>( record->data() );
record->m_destroy = Destroy( m_pool , m_chunks , m_chunk_max );
// Initialize to zero
record->m_destroy.construct_shared_allocation();
m_track.assign_allocated_record_to_uninitialized( record );
}
};
} // namespace Experimental
} // namespace Kokkos
namespace Kokkos {
namespace Experimental {
template< class T , class ... P >
inline
typename Kokkos::Experimental::DynamicView<T,P...>::HostMirror
create_mirror_view( const Kokkos::Experimental::DynamicView<T,P...> & src )
{
return src ;
}
template< class T , class ... DP , class ... SP >
inline
void deep_copy( const View<T,DP...> & dst
, const DynamicView<T,SP...> & src
)
{
typedef View<T,DP...> dst_type ;
typedef DynamicView<T,SP...> src_type ;
typedef typename ViewTraits<T,DP...>::execution_space dst_execution_space ;
typedef typename ViewTraits<T,SP...>::memory_space src_memory_space ;
enum { DstExecCanAccessSrc =
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace< typename dst_execution_space::memory_space , src_memory_space >::value };
if ( DstExecCanAccessSrc ) {
// Copying data between views in accessible memory spaces and either non-contiguous or incompatible shape.
Kokkos::Experimental::Impl::ViewRemap< dst_type , src_type >( dst , src );
}
else {
Kokkos::Impl::throw_runtime_exception("deep_copy given views that would require a temporary allocation");
}
}
template< class T , class ... DP , class ... SP >
inline
void deep_copy( const DynamicView<T,DP...> & dst
, const View<T,SP...> & src
)
{
typedef DynamicView<T,SP...> dst_type ;
typedef View<T,DP...> src_type ;
typedef typename ViewTraits<T,DP...>::execution_space dst_execution_space ;
typedef typename ViewTraits<T,SP...>::memory_space src_memory_space ;
enum { DstExecCanAccessSrc =
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace< typename dst_execution_space::memory_space , src_memory_space >::value };
if ( DstExecCanAccessSrc ) {
// Copying data between views in accessible memory spaces and either non-contiguous or incompatible shape.
Kokkos::Experimental::Impl::ViewRemap< dst_type , src_type >( dst , src );
}
else {
Kokkos::Impl::throw_runtime_exception("deep_copy given views that would require a temporary allocation");
}
}
} // namespace Experimental
} // namespace Kokkos
#endif /* #ifndef KOKKOS_DYNAMIC_VIEW_HPP */
|