This file is indexed.

/usr/include/trilinos/Ifpack2_BlockRelaxation_def.hpp is in libtrilinos-ifpack2-dev 12.10.1-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
/*@HEADER
// ***********************************************************************
//
//       Ifpack2: Tempated Object-Oriented Algebraic Preconditioner Package
//                 Copyright (2009) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ***********************************************************************
//@HEADER
*/

#ifndef IFPACK2_BLOCKRELAXATION_DEF_HPP
#define IFPACK2_BLOCKRELAXATION_DEF_HPP

#include "Ifpack2_BlockRelaxation_decl.hpp"
#include "Ifpack2_LinearPartitioner.hpp"
#include "Ifpack2_LinePartitioner.hpp"
#include "Ifpack2_Details_UserPartitioner_decl.hpp"
#include "Ifpack2_Details_UserPartitioner_def.hpp"
#include <Ifpack2_Parameters.hpp>

namespace Ifpack2 {

template<class MatrixType,class ContainerType>
void BlockRelaxation<MatrixType,ContainerType>::
setMatrix (const Teuchos::RCP<const row_matrix_type>& A)
{
  if (A.getRawPtr () != A_.getRawPtr ()) { // it's a different matrix
    IsInitialized_ = false;
    IsComputed_ = false;
    Partitioner_ = Teuchos::null;
    W_ = Teuchos::null;

    if (! A.is_null ()) {
      IsParallel_ = (A->getRowMap ()->getComm ()->getSize () != 1);
      Teuchos::RCP<const block_crs_matrix_type> A_bcrs =
        Teuchos::rcp_dynamic_cast<const block_crs_matrix_type> (A);
      hasBlockCrsMatrix_ = !A_bcrs.is_null();
    }
    if (! Container_.is_null ()) {
      Container_->clearBlocks();
    }
    NumLocalBlocks_ = 0;

    A_ = A;
    computeImporter();
  }
}

template<class MatrixType,class ContainerType>
BlockRelaxation<MatrixType,ContainerType>::
BlockRelaxation (const Teuchos::RCP<const row_matrix_type>& A)
:
  Time_ (Teuchos::rcp (new Teuchos::Time ("Ifpack2::BlockRelaxation"))),
  Container_ (Teuchos::null),
  Partitioner_ (Teuchos::null),
  PartitionerType_ ("linear"),
  NumSweeps_ (1),
  NumLocalBlocks_(0),
  containerType_ ("Dense"),
  PrecType_ (Ifpack2::Details::JACOBI),
  ZeroStartingSolution_ (true),
  hasBlockCrsMatrix_ (false),
  DoBackwardGS_ (false),
  OverlapLevel_ (0),
  DampingFactor_ (STS::one ()),
  IsInitialized_ (false),
  IsComputed_ (false),
  NumInitialize_ (0),
  NumCompute_ (0),
  NumApply_ (0),
  InitializeTime_ (0.0),
  ComputeTime_ (0.0),
  NumLocalRows_ (0),
  NumGlobalRows_ (0),
  NumGlobalNonzeros_ (0),
  W_ (Teuchos::null),
  Importer_ (Teuchos::null)
{
  setMatrix(A);
}

template<class MatrixType,class ContainerType>
BlockRelaxation<MatrixType,ContainerType>::
~BlockRelaxation ()
{}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
setParameters (const Teuchos::ParameterList& List)
{
  //Teuchos::ParameterList validparams;
  //Ifpack2::getValidParameters (validparams);
  //List.validateParameters (validparams);

  // Don't change ANY parameter unless the user specified it
  // explicitly, thus indicating that the user wants to change it.
  // This avoids the (not really sensible) defaults in
  // Ifpack2::getValidParameters.

  if (List.isParameter ("relaxation: container")) {
    // If the container type isn't a string, this will throw, but it
    // rightfully should.
    containerType_ = List.get<std::string> ("relaxation: container");
  }

  if (List.isParameter ("relaxation: type")) {
    const std::string relaxType = List.get<std::string> ("relaxation: type");

    if (relaxType == "Jacobi") {
      PrecType_ = Ifpack2::Details::JACOBI;
    }
    else if (relaxType == "Gauss-Seidel") {
      PrecType_ = Ifpack2::Details::GS;
    }
    else if (relaxType == "Symmetric Gauss-Seidel") {
      PrecType_ = Ifpack2::Details::SGS;
    }
    else {
      TEUCHOS_TEST_FOR_EXCEPTION
        (true, std::invalid_argument, "Ifpack2::BlockRelaxation::"
         "setParameters: Invalid parameter value \"" << relaxType
         << "\" for parameter \"relaxation: type\".");
    }
  }

  if (List.isParameter ("relaxation: sweeps")) {
    NumSweeps_ = List.get<int> ("relaxation: sweeps");
  }

  // Users may specify this as a floating-point literal.  In that
  // case, it may have type double, even if scalar_type is something
  // else.  We take care to try the various types that make sense.
  if (List.isParameter ("relaxation: damping factor")) {
    if (List.isType<double> ("relaxation: damping factor")) {
      const double dampingFactor =
        List.get<double> ("relaxation: damping factor");
      DampingFactor_ = static_cast<scalar_type> (dampingFactor);
    }
    else if (List.isType<scalar_type> ("relaxation: damping factor")) {
      DampingFactor_ = List.get<scalar_type> ("relaxation: damping factor");
    }
    else if (List.isType<magnitude_type> ("relaxation: damping factor")) {
      const magnitude_type dampingFactor =
        List.get<magnitude_type> ("relaxation: damping factor");
      DampingFactor_ = static_cast<scalar_type> (dampingFactor);
    }
    else {
      TEUCHOS_TEST_FOR_EXCEPTION
        (true, std::invalid_argument, "Ifpack2::BlockRelaxation::"
         "setParameters: Parameter \"relaxation: damping factor\" "
         "has the wrong type.");
    }
  }

  if (List.isParameter ("relaxation: zero starting solution")) {
    ZeroStartingSolution_ = List.get<bool> ("relaxation: zero starting solution");
  }

  if (List.isParameter ("relaxation: backward mode")) {
    DoBackwardGS_ = List.get<bool> ("relaxation: backward mode");
  }

  if (List.isParameter ("partitioner: type")) {
    PartitionerType_ = List.get<std::string> ("partitioner: type");
  }

  // Users may specify this as an int literal, so we need to allow
  // both int and local_ordinal_type (not necessarily same as int).
  if (List.isParameter ("partitioner: local parts")) {
    if (List.isType<local_ordinal_type> ("partitioner: local parts")) {
      NumLocalBlocks_ = List.get<local_ordinal_type> ("partitioner: local parts");
    }
    else if (! std::is_same<int, local_ordinal_type>::value &&
             List.isType<int> ("partitioner: local parts")) {
      NumLocalBlocks_ = List.get<int> ("partitioner: local parts");
    }
    else {
      TEUCHOS_TEST_FOR_EXCEPTION
        (true, std::invalid_argument, "Ifpack2::BlockRelaxation::"
         "setParameters: Parameter \"partitioner: local parts\" "
         "has the wrong type.");
    }
  }

  if (List.isParameter ("partitioner: overlap level")) {
    if (List.isType<int> ("partitioner: overlap level")) {
      OverlapLevel_ = List.get<int> ("partitioner: overlap level");
    }
    else if (! std::is_same<int, local_ordinal_type>::value &&
             List.isType<local_ordinal_type> ("partitioner: overlap level")) {
      OverlapLevel_ = List.get<local_ordinal_type> ("partitioner: overlap level");
    }
    else {
      TEUCHOS_TEST_FOR_EXCEPTION
        (true, std::invalid_argument, "Ifpack2::BlockRelaxation::"
         "setParameters: Parameter \"partitioner: overlap level\" "
         "has the wrong type.");
    }
  }

  std::string defaultContainer = "Dense";
  if(std::is_same<ContainerType, Container<MatrixType> >::value)
  {
    //Generic container template parameter, container type specified in List
    Ifpack2::getParameter(List, "relaxation: container", defaultContainer);
  }
  // check parameters
  if (PrecType_ != Ifpack2::Details::JACOBI) {
    OverlapLevel_ = 0;
  }
  if (NumLocalBlocks_ < static_cast<local_ordinal_type> (0)) {
    NumLocalBlocks_ = A_->getNodeNumRows() / (-NumLocalBlocks_);
  }
  // other checks are performed in Partitioner_

  // NTS: Sanity check to be removed at a later date when Backward mode is enabled
  TEUCHOS_TEST_FOR_EXCEPTION(
    DoBackwardGS_, std::runtime_error,
    "Ifpack2::BlockRelaxation:setParameters: Setting the \"relaxation: "
    "backward mode\" parameter to true is not yet supported.");

  // copy the list as each subblock's constructor will
  // require it later
  List_ = List;
}

template<class MatrixType,class ContainerType>
Teuchos::RCP<const Teuchos::Comm<int> >
BlockRelaxation<MatrixType,ContainerType>::getComm () const
{
  TEUCHOS_TEST_FOR_EXCEPTION
    (A_.is_null (), std::runtime_error, "Ifpack2::BlockRelaxation::getComm: "
     "The matrix is null.  You must call setMatrix() with a nonnull matrix "
     "before you may call this method.");
  return A_->getComm ();
}

template<class MatrixType,class ContainerType>
Teuchos::RCP<const Tpetra::RowMatrix<typename MatrixType::scalar_type,
                                     typename MatrixType::local_ordinal_type,
                                     typename MatrixType::global_ordinal_type,
                                     typename MatrixType::node_type> >
BlockRelaxation<MatrixType,ContainerType>::getMatrix () const {
  return A_;
}

template<class MatrixType,class ContainerType>
Teuchos::RCP<const Tpetra::Map<typename MatrixType::local_ordinal_type,
                               typename MatrixType::global_ordinal_type,
                               typename MatrixType::node_type> >
BlockRelaxation<MatrixType,ContainerType>::
getDomainMap () const
{
  TEUCHOS_TEST_FOR_EXCEPTION
    (A_.is_null (), std::runtime_error, "Ifpack2::BlockRelaxation::"
     "getDomainMap: The matrix is null.  You must call setMatrix() with a "
     "nonnull matrix before you may call this method.");
  return A_->getDomainMap ();
}

template<class MatrixType,class ContainerType>
Teuchos::RCP<const Tpetra::Map<typename MatrixType::local_ordinal_type,
                               typename MatrixType::global_ordinal_type,
                               typename MatrixType::node_type> >
BlockRelaxation<MatrixType,ContainerType>::
getRangeMap () const
{
  TEUCHOS_TEST_FOR_EXCEPTION
    (A_.is_null (), std::runtime_error, "Ifpack2::BlockRelaxation::"
     "getRangeMap: The matrix is null.  You must call setMatrix() with a "
     "nonnull matrix before you may call this method.");
  return A_->getRangeMap ();
}

template<class MatrixType,class ContainerType>
bool
BlockRelaxation<MatrixType,ContainerType>::
hasTransposeApply () const {
  return true;
}

template<class MatrixType,class ContainerType>
int
BlockRelaxation<MatrixType,ContainerType>::
getNumInitialize () const {
  return NumInitialize_;
}

template<class MatrixType,class ContainerType>
int
BlockRelaxation<MatrixType,ContainerType>::
getNumCompute () const
{
  return NumCompute_;
}

template<class MatrixType,class ContainerType>
int
BlockRelaxation<MatrixType,ContainerType>::
getNumApply () const
{
  return NumApply_;
}

template<class MatrixType,class ContainerType>
double
BlockRelaxation<MatrixType,ContainerType>::
getInitializeTime () const
{
  return InitializeTime_;
}

template<class MatrixType,class ContainerType>
double
BlockRelaxation<MatrixType,ContainerType>::
getComputeTime () const
{
  return ComputeTime_;
}

template<class MatrixType,class ContainerType>
double
BlockRelaxation<MatrixType,ContainerType>::
getApplyTime () const
{
  return ApplyTime_;
}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
apply (const Tpetra::MultiVector<typename MatrixType::scalar_type,
                                 typename MatrixType::local_ordinal_type,
                                 typename MatrixType::global_ordinal_type,
                                 typename MatrixType::node_type>& X,
       Tpetra::MultiVector<typename MatrixType::scalar_type,
                           typename MatrixType::local_ordinal_type,
                           typename MatrixType::global_ordinal_type,
                           typename MatrixType::node_type>& Y,
       Teuchos::ETransp mode,
       scalar_type alpha,
       scalar_type beta) const
{
  TEUCHOS_TEST_FOR_EXCEPTION
    (A_.is_null (), std::runtime_error, "Ifpack2::BlockRelaxation::apply: "
     "The matrix is null.  You must call setMatrix() with a nonnull matrix, "
     "then call initialize() and compute() (in that order), before you may "
     "call this method.");
  TEUCHOS_TEST_FOR_EXCEPTION(
    ! isComputed (), std::runtime_error, "Ifpack2::BlockRelaxation::apply: "
    "isComputed() must be true prior to calling apply.");
  TEUCHOS_TEST_FOR_EXCEPTION(
    X.getNumVectors () != Y.getNumVectors (), std::invalid_argument,
    "Ifpack2::BlockRelaxation::apply: X.getNumVectors() = "
    << X.getNumVectors () << " != Y.getNumVectors() = "
    << Y.getNumVectors () << ".");
  TEUCHOS_TEST_FOR_EXCEPTION(
    mode != Teuchos::NO_TRANS, std::logic_error, "Ifpack2::BlockRelaxation::"
    "apply: This method currently only implements the case mode == Teuchos::"
    "NO_TRANS.  Transposed modes are not currently supported.");
  TEUCHOS_TEST_FOR_EXCEPTION(
    alpha != Teuchos::ScalarTraits<scalar_type>::one (), std::logic_error,
    "Ifpack2::BlockRelaxation::apply: This method currently only implements "
    "the case alpha == 1.  You specified alpha = " << alpha << ".");
  TEUCHOS_TEST_FOR_EXCEPTION(
    beta != Teuchos::ScalarTraits<scalar_type>::zero (), std::logic_error,
    "Ifpack2::BlockRelaxation::apply: This method currently only implements "
    "the case beta == 0.  You specified beta = " << beta << ".");

  Time_->start(true);

  // If X and Y are pointing to the same memory location,
  // we need to create an auxiliary vector, Xcopy
  Teuchos::RCP<const MV> X_copy;
  {
    auto X_lcl_host = X.template getLocalView<Kokkos::HostSpace> ();
    auto Y_lcl_host = Y.template getLocalView<Kokkos::HostSpace> ();
    if (X_lcl_host.ptr_on_device () == Y_lcl_host.ptr_on_device ()) {
      X_copy = rcp (new MV (X, Teuchos::Copy));
    } else {
      X_copy = rcpFromRef (X);
    }
  }

  if (ZeroStartingSolution_) {
    Y.putScalar (STS::zero ());
  }

  // Flops are updated in each of the following.
  switch (PrecType_) {
  case Ifpack2::Details::JACOBI:
    ApplyInverseJacobi(*X_copy,Y);
    break;
  case Ifpack2::Details::GS:
    ApplyInverseGS(*X_copy,Y);
    break;
  case Ifpack2::Details::SGS:
    ApplyInverseSGS(*X_copy,Y);
    break;
  default:
    TEUCHOS_TEST_FOR_EXCEPTION
      (true, std::logic_error, "Ifpack2::BlockRelaxation::apply: Invalid "
       "PrecType_ enum value " << PrecType_ << ".  Valid values are Ifpack2::"
       "Details::JACOBI = " << Ifpack2::Details::JACOBI << ", Ifpack2::Details"
       "::GS = " << Ifpack2::Details::GS << ", and Ifpack2::Details::SGS = "
       << Ifpack2::Details::SGS << ".  Please report this bug to the Ifpack2 "
       "developers.");
  }

  ++NumApply_;
  Time_->stop();
  ApplyTime_ += Time_->totalElapsedTime();
}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
applyMat (const Tpetra::MultiVector<typename MatrixType::scalar_type,
                                    typename MatrixType::local_ordinal_type,
                                    typename MatrixType::global_ordinal_type,
                                    typename MatrixType::node_type>& X,
          Tpetra::MultiVector<typename MatrixType::scalar_type,
                             typename MatrixType::local_ordinal_type,
                             typename MatrixType::global_ordinal_type,
                             typename MatrixType::node_type>& Y,
          Teuchos::ETransp mode) const
{
  A_->apply (X, Y, mode);
}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
initialize ()
{
  using Teuchos::rcp;
  typedef Tpetra::RowGraph<local_ordinal_type, global_ordinal_type, node_type>
    row_graph_type;

  TEUCHOS_TEST_FOR_EXCEPTION
    (A_.is_null (), std::runtime_error, "Ifpack2::BlockRelaxation::initialize: "
     "The matrix is null.  You must call setMatrix() with a nonnull matrix "
     "before you may call this method.");

  // Check whether we have a BlockCrsMatrix
  Teuchos::RCP<const block_crs_matrix_type> A_bcrs =
    Teuchos::rcp_dynamic_cast<const block_crs_matrix_type> (A_);
  hasBlockCrsMatrix_ = !A_bcrs.is_null();
  if (A_bcrs.is_null ()) {
    hasBlockCrsMatrix_ = false;
  }
  else {
    hasBlockCrsMatrix_ = true;
  }

  IsInitialized_ = false;
  Time_->start (true);

  NumLocalRows_      = A_->getNodeNumRows ();
  NumGlobalRows_     = A_->getGlobalNumRows ();
  NumGlobalNonzeros_ = A_->getGlobalNumEntries ();

  // NTS: Will need to add support for Zoltan2 partitions later Also,
  // will need a better way of handling the Graph typing issue.
  // Especially with ordinal types w.r.t the container.
  Partitioner_ = Teuchos::null;

  if (PartitionerType_ == "linear") {
    Partitioner_ =
      rcp (new Ifpack2::LinearPartitioner<row_graph_type> (A_->getGraph ()));
  } else if (PartitionerType_ == "line") {
    Partitioner_ =
      rcp (new Ifpack2::LinePartitioner<row_graph_type,typename MatrixType::scalar_type> (A_->getGraph ()));
  } else if (PartitionerType_ == "user") {
    Partitioner_ =
      rcp (new Ifpack2::Details::UserPartitioner<row_graph_type> (A_->getGraph () ) );
  } else {
    // We should have checked for this in setParameters(), so it's a
    // logic_error, not an invalid_argument or runtime_error.
    TEUCHOS_TEST_FOR_EXCEPTION
      (true, std::logic_error, "Ifpack2::BlockRelaxation::initialize: Unknown "
       "partitioner type " << PartitionerType_ << ".  Valid values are "
       "\"linear\", \"line\", and \"user\".");
  }

  // need to partition the graph of A
  Partitioner_->setParameters (List_);
  Partitioner_->compute ();

  // get actual number of partitions
  NumLocalBlocks_ = Partitioner_->numLocalParts ();

  // Note: Unlike Ifpack, we'll punt on computing W_ until compute(), which is where
  // we assume that the type of relaxation has been chosen.

  if (A_->getComm()->getSize() != 1) {
    IsParallel_ = true;
  } else {
    IsParallel_ = false;
  }

  ++NumInitialize_;
  Time_->stop ();
  InitializeTime_ += Time_->totalElapsedTime ();
  IsInitialized_ = true;
}


template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
computeBlockCrs ()
{
  // typedef Tpetra::Map<local_ordinal_type,global_ordinal_type,node_type>     map_type; // unused
  // typedef Tpetra::Import<local_ordinal_type,global_ordinal_type, node_type> import_type; // unused
  using Teuchos::Ptr;
  using Teuchos::RCP;
  using Teuchos::rcp;
  using Teuchos::Array;
  using Teuchos::ArrayView;

  Time_->start (true);

  // reset values
  IsComputed_ = false;

  // Extract the submatrices
  ExtractSubmatrices ();

  // Compute the weight vector if we're doing overlapped Jacobi (and
  // only if we're doing overlapped Jacobi).
  TEUCHOS_TEST_FOR_EXCEPTION
    (PrecType_ == Ifpack2::Details::JACOBI && OverlapLevel_ > 0, std::runtime_error,
     "Ifpack2::BlockRelaxation::computeBlockCrs: "
     "We do not support overlapped Jacobi yet for Tpetra::BlockCrsMatrix.  Sorry!");

  ++NumCompute_;
  Time_->stop ();
  ComputeTime_ += Time_->totalElapsedTime();
  IsComputed_ = true;
}


template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
compute ()
{
  using Teuchos::rcp;
  typedef Tpetra::Vector<scalar_type,
    local_ordinal_type, global_ordinal_type, node_type> vector_type;
  // typedef Tpetra::Import<local_ordinal_type,
  //   global_ordinal_type, node_type> import_type; // unused

  TEUCHOS_TEST_FOR_EXCEPTION
    (A_.is_null (), std::runtime_error, "Ifpack2::BlockRelaxation::compute: "
     "The matrix is null.  You must call setMatrix() with a nonnull matrix, "
     "then call initialize(), before you may call this method.");

  // We should have checked for this in setParameters(), so it's a
  // logic_error, not an invalid_argument or runtime_error.
  TEUCHOS_TEST_FOR_EXCEPTION
    (NumSweeps_ < 0, std::logic_error, "Ifpack2::BlockRelaxation::compute: "
     "NumSweeps_ = " << NumSweeps_ << " < 0.");

  if (! isInitialized ()) {
    initialize ();
  }

  if (hasBlockCrsMatrix_) {
    computeBlockCrs ();
    return;
  }

  Time_->start (true);

  // reset values
  IsComputed_ = false;

  // Extract the submatrices
  ExtractSubmatrices ();

  // Compute the weight vector if we're doing overlapped Jacobi (and
  // only if we're doing overlapped Jacobi).
  if (PrecType_ == Ifpack2::Details::JACOBI && OverlapLevel_ > 0) {
    // weight of each vertex
    W_ = rcp (new vector_type (A_->getRowMap ()));
    W_->putScalar (STS::zero ());
    Teuchos::ArrayRCP<scalar_type > w_ptr = W_->getDataNonConst(0);

    for (local_ordinal_type i = 0 ; i < NumLocalBlocks_ ; ++i) {
      for (size_t j = 0 ; j < Partitioner_->numRowsInPart(i) ; ++j) {
        // FIXME (mfh 12 Sep 2014) Should this really be int?
        // Perhaps it should be local_ordinal_type instead.
        int LID = (*Partitioner_)(i,j);
        w_ptr[LID]+= STS::one();
      }
    }
    W_->reciprocal (*W_);
  }
  ++NumCompute_;
  Time_->stop ();
  ComputeTime_ += Time_->totalElapsedTime();
  IsComputed_ = true;
}

template<class MatrixType, class ContainerType>
void
BlockRelaxation<MatrixType, ContainerType>::
ExtractSubmatrices ()
{
  TEUCHOS_TEST_FOR_EXCEPTION
    (Partitioner_.is_null (), std::runtime_error, "Ifpack2::BlockRelaxation::"
     "ExtractSubmatrices: Partitioner object is null.");

  NumLocalBlocks_ = Partitioner_->numLocalParts ();
  std::string containerType = ContainerType::getName ();
  if (containerType == "Generic") {
    // ContainerType is Container<row_matrix_type>.  Thus, we need to
    // get the container name from the parameter list.  We use "Dense"
    // as the default container type.
    containerType = containerType_;
  }

  Teuchos::Array<Teuchos::Array<local_ordinal_type> > localRows(NumLocalBlocks_);
  for (local_ordinal_type i = 0; i < NumLocalBlocks_; ++i) {
    const size_t numRows = Partitioner_->numRowsInPart (i);

    localRows[i].resize(numRows);
    // Extract a list of the indices of each partitioner row.
    for (size_t j = 0; j < numRows; ++j) {
      localRows[i][j] = (*Partitioner_) (i,j);
    }
  }
  Container_ = Teuchos::rcp_static_cast<Container<MatrixType>>
    (Details::createContainer<row_matrix_type> (containerType, A_, localRows, Importer_,
      OverlapLevel_, DampingFactor_));
  Container_->setParameters(List_);
  Container_->initialize();
  Container_->compute();   //initialize + compute each block matrix
}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
ApplyInverseJacobi (const MV& X, MV& Y) const
{
  const size_t NumVectors = X.getNumVectors ();
  typename ContainerType::HostView XView = X.template getLocalView<Kokkos::HostSpace>();
  typename ContainerType::HostView YView = Y.template getLocalView<Kokkos::HostSpace>();
  MV AY (Y.getMap (), NumVectors);

  typename ContainerType::HostView AYView = AY.template getLocalView<Kokkos::HostSpace>();
  // Initial matvec not needed
  int starting_iteration = 0;
  if (OverlapLevel_ > 0)
  {
    //Overlapping jacobi, with view of W_
    typename ContainerType::HostView WView = W_->template getLocalView<Kokkos::HostSpace>();
    if(ZeroStartingSolution_) {
      Container_->DoOverlappingJacobi(XView, YView, WView, X.getStride());
      starting_iteration = 1;
    }
    const scalar_type ONE = STS::one();
    for(int j = starting_iteration; j < NumSweeps_; j++)
    {
      applyMat (Y, AY);
      AY.update (ONE, X, -ONE);
      Container_->DoOverlappingJacobi (AYView, YView, WView, X.getStride());
    }
  }
  else
  {
    //Non-overlapping
    if(ZeroStartingSolution_)
    {
      Container_->DoJacobi (XView, YView, X.getStride());
      starting_iteration = 1;
    }
    const scalar_type ONE = STS::one();
    for(int j = starting_iteration; j < NumSweeps_; j++)
    {
      applyMat (Y, AY);
      AY.update (ONE, X, -ONE);
      Container_->DoJacobi (AYView, YView, X.getStride());
    }
  }
}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
ApplyInverseGS (const MV& X, MV& Y) const
{
  using Teuchos::Ptr;
  using Teuchos::ptr;
  size_t numVecs = X.getNumVectors();
  //Get view of X (is never modified in this function)
  typename ContainerType::HostView XView = X.template getLocalView<Kokkos::HostSpace>();
  typename ContainerType::HostView YView = Y.template getLocalView<Kokkos::HostSpace>();
  //Pre-import Y, if parallel
  Ptr<MV> Y2;
  bool deleteY2 = false;
  if(IsParallel_)
  {
    Y2 = ptr(new MV(Importer_->getTargetMap(), numVecs));
    deleteY2 = true;
  }
  else
    Y2 = ptr(&Y);
  if(IsParallel_)
  {
    for(int j = 0; j < NumSweeps_; ++j)
    {
      //do import once per sweep
      Y2->doImport(Y, *Importer_, Tpetra::INSERT);
      typename ContainerType::HostView Y2View = Y2->template getLocalView<Kokkos::HostSpace>();
      Container_->DoGaussSeidel(XView, YView, Y2View, X.getStride());
    }
  }
  else
  {
    typename ContainerType::HostView Y2View = Y2->template getLocalView<Kokkos::HostSpace>();
    for(int j = 0; j < NumSweeps_; ++j)
    {
      Container_->DoGaussSeidel(XView, YView, Y2View, X.getStride());
    }
  }
  if(deleteY2)
    delete Y2.get();
}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
ApplyInverseSGS (const MV& X, MV& Y) const
{
  using Teuchos::Ptr;
  using Teuchos::ptr;
  //Get view of X (is never modified in this function)
  typename ContainerType::HostView XView = X.template getLocalView<Kokkos::HostSpace>();
  typename ContainerType::HostView YView = Y.template getLocalView<Kokkos::HostSpace>();
  //Pre-import Y, if parallel
  Ptr<MV> Y2;
  bool deleteY2 = false;
  if(IsParallel_)
  {
    Y2 = ptr(new MV(Importer_->getTargetMap(), X.getNumVectors()));
    deleteY2 = true;
  }
  else
    Y2 = ptr(&Y);
  if(IsParallel_)
  {
    for(int j = 0; j < NumSweeps_; ++j)
    {
      //do import once per sweep
      Y2->doImport(Y, *Importer_, Tpetra::INSERT);
      typename ContainerType::HostView Y2View = Y2->template getLocalView<Kokkos::HostSpace>();
      Container_->DoSGS(XView, YView, Y2View, X.getStride());
    }
  }
  else
  {
    typename ContainerType::HostView Y2View = Y2->template getLocalView<Kokkos::HostSpace>();
    for(int j = 0; j < NumSweeps_; ++j)
    {
      Container_->DoSGS(XView, YView, Y2View, X.getStride());
    }
  }
  if(deleteY2)
    delete Y2.get();
}

template<class MatrixType,class ContainerType>
void BlockRelaxation<MatrixType,ContainerType>::computeImporter () const
{
  using Teuchos::RCP;
  using Teuchos::rcp;
  using Teuchos::Ptr;
  using Teuchos::ArrayView;
  using Teuchos::Array;
  using Teuchos::Comm;
  using Teuchos::rcp_dynamic_cast;
  if(IsParallel_)
  {
    if(hasBlockCrsMatrix_)
    {
      const RCP<const block_crs_matrix_type> bcrs =
        rcp_dynamic_cast<const block_crs_matrix_type>(A_);
      int bs_ = bcrs->getBlockSize();
      RCP<const map_type> oldDomainMap = A_->getDomainMap();
      RCP<const map_type> oldColMap = A_->getColMap();
      // Because A is a block CRS matrix, import will not do what you think it does
      // We have to construct the correct maps for it
      global_size_t numGlobalElements = oldColMap->getGlobalNumElements() * bs_;
      global_ordinal_type indexBase = oldColMap->getIndexBase();
      RCP<const Comm<int>> comm = oldColMap->getComm();
      ArrayView<const global_ordinal_type> oldColElements = oldColMap->getNodeElementList();
      Array<global_ordinal_type> newColElements(bs_ * oldColElements.size());
      for(int i = 0; i < oldColElements.size(); i++)
      {
        for(int j = 0; j < bs_; j++)
          newColElements[i * bs_ + j] = oldColElements[i] * bs_ + j;
      }
      RCP<map_type> colMap(new map_type(numGlobalElements, newColElements, indexBase, comm));
      // Create the importer
      Importer_ = rcp(new import_type(oldDomainMap, colMap));
    }
    else if(!A_.is_null())
    {
      Importer_ = A_->getGraph()->getImporter();
      if(Importer_.is_null())
        Importer_ = rcp(new import_type(A_->getDomainMap(), A_->getColMap()));
    }
  }
  //otherwise, Importer_ is not needed and is left NULL
}

template<class MatrixType, class ContainerType>
std::string
BlockRelaxation<MatrixType,ContainerType>::
description () const
{
  std::ostringstream out;

  // Output is a valid YAML dictionary in flow style.  If you don't
  // like everything on a single line, you should call describe()
  // instead.
  out << "\"Ifpack2::BlockRelaxation\": {";
  if (this->getObjectLabel () != "") {
    out << "Label: \"" << this->getObjectLabel () << "\", ";
  }
  out << "Initialized: " << (isInitialized () ? "true" : "false") << ", ";
  out << "Computed: " << (isComputed () ? "true" : "false") << ", ";
  if (A_.is_null ()) {
    out << "Matrix: null, ";
  }
  else {
    out << "Matrix: not null"
        << ", Global matrix dimensions: ["
        << A_->getGlobalNumRows () << ", " << A_->getGlobalNumCols () << "], ";
  }

  // It's useful to print this instance's relaxation method.  If you
  // want more info than that, call describe() instead.
  out << "\"relaxation: type\": ";
  if (PrecType_ == Ifpack2::Details::JACOBI) {
    out << "Block Jacobi";
  } else if (PrecType_ == Ifpack2::Details::GS) {
    out << "Block Gauss-Seidel";
  } else if (PrecType_ == Ifpack2::Details::SGS) {
    out << "Block Symmetric Gauss-Seidel";
  } else {
    out << "INVALID";
  }

  out  << ", " << "sweeps: " << NumSweeps_ << ", "
      << "damping factor: " << DampingFactor_ << ", ";

  out << "}";
  return out.str();
}

template<class MatrixType,class ContainerType>
void
BlockRelaxation<MatrixType,ContainerType>::
describe (Teuchos::FancyOStream& out,
          const Teuchos::EVerbosityLevel verbLevel) const
{
  using std::endl;
  using std::setw;
  using Teuchos::TypeNameTraits;
  using Teuchos::VERB_DEFAULT;
  using Teuchos::VERB_NONE;
  using Teuchos::VERB_LOW;
  using Teuchos::VERB_MEDIUM;
  using Teuchos::VERB_HIGH;
  using Teuchos::VERB_EXTREME;

  Teuchos::EVerbosityLevel vl = verbLevel;
  if (vl == VERB_DEFAULT) vl = VERB_LOW;
  const int myImageID = A_->getComm()->getRank();

  // Convention requires that describe() begin with a tab.
  Teuchos::OSTab tab (out);

  //    none: print nothing
  //     low: print O(1) info from node 0
  //  medium:
  //    high:
  // extreme:
  if (vl != VERB_NONE && myImageID == 0) {
    out << "Ifpack2::BlockRelaxation<"
        << TypeNameTraits<MatrixType>::name () << ", "
        << TypeNameTraits<ContainerType>::name () << " >:";
    Teuchos::OSTab tab1 (out);

    if (this->getObjectLabel () != "") {
      out << "label: \"" << this->getObjectLabel () << "\"" << endl;
    }
    out << "initialized: " << (isInitialized () ? "true" : "false") << endl
        << "computed: " << (isComputed () ? "true" : "false") << endl;

    std::string precType;
    if (PrecType_ == Ifpack2::Details::JACOBI) {
      precType = "Block Jacobi";
    } else if (PrecType_ == Ifpack2::Details::GS) {
      precType = "Block Gauss-Seidel";
    } else if (PrecType_ == Ifpack2::Details::SGS) {
      precType = "Block Symmetric Gauss-Seidel";
    }
    out << "type: " << precType << endl
        << "global number of rows: " << A_->getGlobalNumRows () << endl
        << "global number of columns: " << A_->getGlobalNumCols () << endl
        << "number of sweeps: " << NumSweeps_ << endl
        << "damping factor: " << DampingFactor_ << endl
        << "backwards mode: "
        << ((PrecType_ == Ifpack2::Details::GS && DoBackwardGS_) ? "true" : "false")
        << endl
        << "zero starting solution: "
        << (ZeroStartingSolution_ ? "true" : "false") << endl;
  }
}

}//namespace Ifpack2


// Macro that does explicit template instantiation (ETI) for
// Ifpack2::BlockRelaxation.  S, LO, GO, N correspond to the four
// template parameters of Ifpack2::Preconditioner and
// Tpetra::RowMatrix.
//
// We only instantiate for MatrixType = Tpetra::RowMatrix.  There's no
// need to instantiate for Tpetra::CrsMatrix too.  All Ifpack2
// preconditioners can and should do dynamic casts if they need a type
// more specific than RowMatrix.  This keeps build time short and
// library and executable sizes small.

#ifdef HAVE_IFPACK2_EXPLICIT_INSTANTIATION

#define IFPACK2_BLOCKRELAXATION_INSTANT(S,LO,GO,N) \
  template \
  class Ifpack2::BlockRelaxation<      \
    Tpetra::RowMatrix<S, LO, GO, N>,   \
    Ifpack2::Container<Tpetra::RowMatrix<S, LO, GO, N> > >;

#endif // HAVE_IFPACK2_EXPLICIT_INSTANTIATION

#endif // IFPACK2_BLOCKRELAXATION_DEF_HPP