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/usr/include/trilinos/klu2_factor.hpp is in libtrilinos-amesos2-dev 12.10.1-3.

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The actual contents of the file can be viewed below.

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/* ========================================================================== */
/* === KLU_factor =========================================================== */
/* ========================================================================== */
// @HEADER
// ***********************************************************************
//
//                   KLU2: A Direct Linear Solver package
//                    Copyright 2011 Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, with Sandia Corporation, the 
// U.S. Government retains certain rights in this software.
//
// This library is free software; you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as
// published by the Free Software Foundation; either version 2.1 of the
// License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful, but
// WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
// Lesser General Public License for more details.
// 
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
// USA
// Questions? Contact Mike A. Heroux (maherou@sandia.gov)
//
// KLU2 is derived work from KLU, licensed under LGPL, and copyrighted by
// University of Florida. The Authors of KLU are Timothy A. Davis and
// Eka Palamadai. See Doc/KLU_README.txt for the licensing and copyright
// information for KLU.
//
// ***********************************************************************
// @HEADER

/* Factor the matrix, after ordering and analyzing it with KLU_analyze
 * or KLU_analyze_given.
 */

#ifndef KLU2_FACTOR_HPP
#define KLU2_FACTOR_HPP

#include "klu2_internal.h"
#include "klu2.hpp"
#include "klu2_memory.hpp"
#include "klu2_scale.hpp"


/* ========================================================================== */
/* === KLU_factor2 ========================================================== */
/* ========================================================================== */

template <typename Entry, typename Int>
static void factor2
(
    /* inputs, not modified */
    Int Ap [ ],         /* size n+1, column pointers */
    Int Ai [ ],         /* size nz, row indices */
    Entry Ax [ ],
    KLU_symbolic<Entry, Int> *Symbolic,

    /* inputs, modified on output: */
    KLU_numeric<Entry, Int> *Numeric,
    KLU_common<Entry, Int> *Common
)
{
    double lsize ;
    double *Lnz, *Rs ;
    Int *P, *Q, *R, *Pnum, *Offp, *Offi, *Pblock, *Pinv, *Iwork,
        *Lip, *Uip, *Llen, *Ulen ;
    Entry *Offx, *X, s, *Udiag ;
    Unit **LUbx ;
    Int k1, k2, nk, k, block, oldcol, pend, oldrow, n, lnz, unz, p, newrow,
        nblocks, poff, nzoff, lnz_block, unz_block, scale, max_lnz_block,
        max_unz_block ;

    /* ---------------------------------------------------------------------- */
    /* initializations */
    /* ---------------------------------------------------------------------- */

    /* get the contents of the Symbolic object */
    n = Symbolic->n ;
    P = Symbolic->P ;
    Q = Symbolic->Q ;
    R = Symbolic->R ;
    Lnz = Symbolic->Lnz ;
    nblocks = Symbolic->nblocks ;
    nzoff = Symbolic->nzoff ;

    Pnum = Numeric->Pnum ;
    Offp = Numeric->Offp ;
    Offi = Numeric->Offi ;
    Offx = (Entry *) Numeric->Offx ;

    Lip = Numeric->Lip ;
    Uip = Numeric->Uip ;
    Llen = Numeric->Llen ;
    Ulen = Numeric->Ulen ;
    LUbx = (Unit **) Numeric->LUbx ;
    Udiag = (Entry *) Numeric->Udiag ;

    Rs = Numeric->Rs ;
    Pinv = Numeric->Pinv ;
    X = (Entry *) Numeric->Xwork ;              /* X is of size n */
    Iwork = Numeric->Iwork ;                    /* 5*maxblock for KLU_factor */
                                                /* 1*maxblock for Pblock */
    Pblock = Iwork + 5*((size_t) Symbolic->maxblock) ;
    Common->nrealloc = 0 ;
    scale = Common->scale ;
    max_lnz_block = 1 ;
    max_unz_block = 1 ;

    /* compute the inverse of P from symbolic analysis.  Will be updated to
     * become the inverse of the numerical factorization when the factorization
     * is done, for use in KLU_refactor */
#ifndef NDEBUG
    for (k = 0 ; k < n ; k++)
    {
        Pinv [k] = EMPTY ;
    }
#endif
    for (k = 0 ; k < n ; k++)
    {
        ASSERT (P [k] >= 0 && P [k] < n) ;
        Pinv [P [k]] = k ;
    }
#ifndef NDEBUG
    for (k = 0 ; k < n ; k++) ASSERT (Pinv [k] != EMPTY) ;
#endif

    lnz = 0 ;
    unz = 0 ;
    Common->noffdiag = 0 ;
    Offp [0] = 0 ;

    /* ---------------------------------------------------------------------- */
    /* optionally check input matrix and compute scale factors */
    /* ---------------------------------------------------------------------- */

    if (scale >= 0)
    {
        /* use Pnum as workspace. NOTE: scale factors are not yet permuted
         * according to the final pivot row ordering, so Rs [oldrow] is the
         * scale factor for A (oldrow,:), for the user's matrix A.  Pnum is
         * used as workspace in KLU_scale.  When the factorization is done,
         * the scale factors are permuted according to the final pivot row
         * permutation, so that Rs [k] is the scale factor for the kth row of
         * A(p,q) where p and q are the final row and column permutations. */
        /*KLU_scale (scale, n, Ap, Ai, (double *) Ax, Rs, Pnum, Common) ;*/
        KLU_scale (scale, n, Ap, Ai, Ax, Rs, Pnum, Common) ;
        if (Common->status < KLU_OK)
        {
            /* matrix is invalid */
            return ;
        }
    }

#ifndef NDEBUG
    if (scale > 0)
    {
        for (k = 0 ; k < n ; k++) PRINTF (("Rs [%d] %g\n", k, Rs [k])) ;
    }
#endif

    /* ---------------------------------------------------------------------- */
    /* factor each block using klu */
    /* ---------------------------------------------------------------------- */

    for (block = 0 ; block < nblocks ; block++)
    {

        /* ------------------------------------------------------------------ */
        /* the block is from rows/columns k1 to k2-1 */
        /* ------------------------------------------------------------------ */

        k1 = R [block] ;
        k2 = R [block+1] ;
        nk = k2 - k1 ;
        PRINTF (("FACTOR BLOCK %d, k1 %d k2-1 %d nk %d\n", block, k1,k2-1,nk)) ;

        if (nk == 1)
        {

            /* -------------------------------------------------------------- */
            /* singleton case */
            /* -------------------------------------------------------------- */

            poff = Offp [k1] ;
            oldcol = Q [k1] ;
            pend = Ap [oldcol+1] ;
            CLEAR (s) ;

            if (scale <= 0)
            {
                /* no scaling */
                for (p = Ap [oldcol] ; p < pend ; p++)
                {
                    oldrow = Ai [p] ;
                    newrow = Pinv [oldrow] ;
                    if (newrow < k1)
                    {
                        Offi [poff] = oldrow ;
                        Offx [poff] = Ax [p] ;
                        poff++ ;
                    }
                    else
                    {
                        ASSERT (newrow == k1) ;
                        PRINTF (("singleton block %d", block)) ;
                        PRINT_ENTRY (Ax [p]) ;
                        s = Ax [p] ;
                    }
                }
            }
            else
            {
                /* row scaling.  NOTE: scale factors are not yet permuted
                 * according to the pivot row permutation, so Rs [oldrow] is
                 * used below.  When the factorization is done, the scale
                 * factors are permuted, so that Rs [newrow] will be used in
                 * klu_solve, klu_tsolve, and klu_rgrowth */
                for (p = Ap [oldcol] ; p < pend ; p++)
                {
                    oldrow = Ai [p] ;
                    newrow = Pinv [oldrow] ;
                    if (newrow < k1)
                    {
                        Offi [poff] = oldrow ;
                        /* Offx [poff] = Ax [p] / Rs [oldrow] ; */
                        SCALE_DIV_ASSIGN (Offx [poff], Ax [p], Rs [oldrow]) ;
                        poff++ ;
                    }
                    else
                    {
                        ASSERT (newrow == k1) ;
                        PRINTF (("singleton block %d ", block)) ;
                        PRINT_ENTRY (Ax[p]) ;
                        SCALE_DIV_ASSIGN (s, Ax [p], Rs [oldrow]) ;
                    }
                }
            }

            Udiag [k1] = s ;

            if (IS_ZERO (s))
            {
                /* singular singleton */
                Common->status = KLU_SINGULAR ;
                Common->numerical_rank = k1 ;
                Common->singular_col = oldcol ;
                if (Common->halt_if_singular)
                {
                    return ;
                }
            }

            Offp [k1+1] = poff ;
            Pnum [k1] = P [k1] ;
            lnz++ ;
            unz++ ;

        }
        else
        {

            /* -------------------------------------------------------------- */
            /* construct and factorize the kth block */
            /* -------------------------------------------------------------- */

            if (Lnz [block] < 0)
            {
                /* COLAMD was used - no estimate of fill-in */
                /* use 10 times the nnz in A, plus n */
                lsize = -(Common->initmem) ;
            }
            else
            {
                lsize = Common->initmem_amd * Lnz [block] + nk ;
            }

            /* allocates 1 arrays: LUbx [block] */
            Numeric->LUsize [block] = KLU_kernel_factor (nk, Ap, Ai, Ax, Q,
                    lsize, &LUbx [block], Udiag + k1, Llen + k1, Ulen + k1,
                    Lip + k1, Uip + k1, Pblock, &lnz_block, &unz_block,
                    X, Iwork, k1, Pinv, Rs, Offp, Offi, Offx, Common) ;

            if (Common->status < KLU_OK ||
               (Common->status == KLU_SINGULAR && Common->halt_if_singular))
            {
                /* out of memory, invalid inputs, or singular */
                return ;
            }

            PRINTF (("\n----------------------- L %d:\n", block)) ;
            ASSERT (KLU_valid_LU (nk, TRUE, Lip+k1, Llen+k1, LUbx [block])) ;
            PRINTF (("\n----------------------- U %d:\n", block)) ;
            ASSERT (KLU_valid_LU (nk, FALSE, Uip+k1, Ulen+k1, LUbx [block])) ;

            /* -------------------------------------------------------------- */
            /* get statistics */
            /* -------------------------------------------------------------- */

            lnz += lnz_block ;
            unz += unz_block ;
            max_lnz_block = MAX (max_lnz_block, lnz_block) ;
            max_unz_block = MAX (max_unz_block, unz_block) ;

            if (Lnz [block] == EMPTY)
            {
                /* revise estimate for subsequent factorization */
                Lnz [block] = MAX (lnz_block, unz_block) ;
            }

            /* -------------------------------------------------------------- */
            /* combine the klu row ordering with the symbolic pre-ordering */
            /* -------------------------------------------------------------- */

            PRINTF (("Pnum, 1-based:\n")) ;
            for (k = 0 ; k < nk ; k++)
            {
                ASSERT (k + k1 < n) ;
                ASSERT (Pblock [k] + k1 < n) ;
                Pnum [k + k1] = P [Pblock [k] + k1] ;
                PRINTF (("Pnum (%d + %d + 1 = %d) = %d + 1 = %d\n",
                    k, k1, k+k1+1, Pnum [k+k1], Pnum [k+k1]+1)) ;
            }

            /* the local pivot row permutation Pblock is no longer needed */
        }
    }
    ASSERT (nzoff == Offp [n]) ;
    PRINTF (("\n------------------- Off diagonal entries:\n")) ;
    ASSERT (KLU_valid (n, Offp, Offi, Offx)) ;

    Numeric->lnz = lnz ;
    Numeric->unz = unz ;
    Numeric->max_lnz_block = max_lnz_block ;
    Numeric->max_unz_block = max_unz_block ;

    /* compute the inverse of Pnum */
#ifndef NDEBUG
    for (k = 0 ; k < n ; k++)
    {
        Pinv [k] = EMPTY ;
    }
#endif
    for (k = 0 ; k < n ; k++)
    {
        ASSERT (Pnum [k] >= 0 && Pnum [k] < n) ;
        Pinv [Pnum [k]] = k ;
    }
#ifndef NDEBUG
    for (k = 0 ; k < n ; k++) ASSERT (Pinv [k] != EMPTY) ;
#endif

    /* permute scale factors Rs according to pivotal row order */
    if (scale > 0)
    {
        for (k = 0 ; k < n ; k++)
        {
            /* TODO : Check. REAL(X[k]) Can be just X[k] */
            /* REAL (X [k]) = Rs [Pnum [k]] ; */
            X [k] = Rs [Pnum [k]] ;
        }
        for (k = 0 ; k < n ; k++)
        {
            Rs [k] = REAL (X [k]) ;
        }
    }

    PRINTF (("\n------------------- Off diagonal entries, old:\n")) ;
    ASSERT (KLU_valid (n, Offp, Offi, Offx)) ;

    /* apply the pivot row permutations to the off-diagonal entries */
    for (p = 0 ; p < nzoff ; p++)
    {
        ASSERT (Offi [p] >= 0 && Offi [p] < n) ;
        Offi [p] = Pinv [Offi [p]] ;
    }

    PRINTF (("\n------------------- Off diagonal entries, new:\n")) ;
    ASSERT (KLU_valid (n, Offp, Offi, Offx)) ;

#ifndef NDEBUG
    {
        PRINTF (("\n ############# KLU_BTF_FACTOR done, nblocks %d\n",nblocks));
        Entry ss, *Udiag = Numeric->Udiag ;
        for (block = 0 ; block < nblocks && Common->status == KLU_OK ; block++)
        {
            k1 = R [block] ;
            k2 = R [block+1] ;
            nk = k2 - k1 ;
            PRINTF (("\n======================KLU_factor output: k1 %d k2 %d nk %d\n",k1,k2,nk)) ;
            if (nk == 1)
            {
                PRINTF (("singleton  ")) ;
                /* ENTRY_PRINT (singleton [block]) ; */
                ss = Udiag [k1] ;
                PRINT_ENTRY (ss) ;
            }
            else
            {
                Int *Lip, *Uip, *Llen, *Ulen ;
                Unit *LU ;
                Lip = Numeric->Lip + k1 ;
                Llen = Numeric->Llen + k1 ;
                LU = (Unit *) Numeric->LUbx [block] ;
                PRINTF (("\n---- L block %d\n", block));
                ASSERT (KLU_valid_LU (nk, TRUE, Lip, Llen, LU)) ;
                Uip = Numeric->Uip + k1 ;
                Ulen = Numeric->Ulen + k1 ;
                PRINTF (("\n---- U block %d\n", block)) ;
                ASSERT (KLU_valid_LU (nk, FALSE, Uip, Ulen, LU)) ;
            }
        }
    }
#endif
}



/* ========================================================================== */
/* === KLU_factor =========================================================== */
/* ========================================================================== */

template <typename Entry, typename Int>
KLU_numeric<Entry, Int> *KLU_factor         /* returns NULL if error, or a valid
                                   KLU_numeric object if successful */
(
    /* --- inputs --- */
    Int Ap [ ],         /* size n+1, column pointers */
    Int Ai [ ],         /* size nz, row indices */
    /* TODO : Checked, switch from double to Entry , still make sure works in all cases */
    Entry Ax [ ],       
    KLU_symbolic<Entry, Int> *Symbolic,
    /* -------------- */
    KLU_common<Entry, Int> *Common
)
{
    Int n, nzoff, nblocks, maxblock, k, ok = TRUE ;

    KLU_numeric<Entry, Int> *Numeric ;
    size_t n1, nzoff1, s, b6, n3 ;

    if (Common == NULL)
    {
        return (NULL) ;
    }
    Common->status = KLU_OK ;
    Common->numerical_rank = EMPTY ;
    Common->singular_col = EMPTY ;

    /* ---------------------------------------------------------------------- */
    /* get the contents of the Symbolic object */
    /* ---------------------------------------------------------------------- */

    /* check for a valid Symbolic object */
    if (Symbolic == NULL)
    {
        Common->status = KLU_INVALID ;
        return (NULL) ;
    }

    n = Symbolic->n ;
    nzoff = Symbolic->nzoff ;
    nblocks = Symbolic->nblocks ;
    maxblock = Symbolic->maxblock ;

    PRINTF (("KLU_factor:  n %d nzoff %d nblocks %d maxblock %d\n",
        n, nzoff, nblocks, maxblock)) ;

    /* ---------------------------------------------------------------------- */
    /* get control parameters and make sure they are in the proper range */
    /* ---------------------------------------------------------------------- */

    Common->initmem_amd = MAX (1.0, Common->initmem_amd) ;
    Common->initmem = MAX (1.0, Common->initmem) ;
    Common->tol = MIN (Common->tol, 1.0) ;
    Common->tol = MAX (0.0, Common->tol) ;
    Common->memgrow = MAX (1.0, Common->memgrow) ;

    /* ---------------------------------------------------------------------- */
    /* allocate the Numeric object  */
    /* ---------------------------------------------------------------------- */

    /* this will not cause size_t overflow (already checked by KLU_symbolic) */
    n1 = ((size_t) n) + 1 ;
    nzoff1 = ((size_t) nzoff) + 1 ;

    Numeric = (KLU_numeric<Entry, Int> *) KLU_malloc (sizeof (KLU_numeric<Entry, Int>), 1, Common) ;
    if (Common->status < KLU_OK)
    {
        /* out of memory */
        Common->status = KLU_OUT_OF_MEMORY ;
        return (NULL) ;
    }
    Numeric->n = n ;
    Numeric->nblocks = nblocks ;
    Numeric->nzoff = nzoff ;
    Numeric->Pnum = (Int *) KLU_malloc (n, sizeof (Int), Common) ;
    Numeric->Offp = (Int *) KLU_malloc (n1, sizeof (Int), Common) ;
    Numeric->Offi = (Int *) KLU_malloc (nzoff1, sizeof (Int), Common) ;
    Numeric->Offx = KLU_malloc (nzoff1, sizeof (Entry), Common) ;

    Numeric->Lip  = (Int *) KLU_malloc (n, sizeof (Int), Common) ;
    Numeric->Uip  = (Int *) KLU_malloc (n, sizeof (Int), Common) ;
    Numeric->Llen = (Int *) KLU_malloc (n, sizeof (Int), Common) ;
    Numeric->Ulen = (Int *) KLU_malloc (n, sizeof (Int), Common) ;

    Numeric->LUsize = (size_t *) KLU_malloc (nblocks, sizeof (size_t), Common) ;

    Numeric->LUbx = (void **) KLU_malloc (nblocks, sizeof (Unit *), Common) ;
    if (Numeric->LUbx != NULL)
    {
        for (k = 0 ; k < nblocks ; k++)
        {
            Numeric->LUbx [k] = NULL ;
        }
    }

    Numeric->Udiag = KLU_malloc (n, sizeof (Entry), Common) ;

    if (Common->scale > 0)
    {
        Numeric->Rs = (double *) KLU_malloc (n, sizeof (double), Common) ;
    }
    else
    {
        /* no scaling */
        Numeric->Rs = NULL ;
    }

    Numeric->Pinv = (Int *) KLU_malloc (n, sizeof (Int), Common) ;

    /* allocate permanent workspace for factorization and solve.  Note that the
     * solver will use an Xwork of size 4n, whereas the factorization codes use
     * an Xwork of size n and integer space (Iwork) of size 6n. KLU_condest
     * uses an Xwork of size 2n.  Total size is:
     *
     *    n*sizeof(Entry) + max (6*maxblock*sizeof(Int), 3*n*sizeof(Entry))
     */
    s = KLU_mult_size_t (n, sizeof (Entry), &ok) ;
    n3 = KLU_mult_size_t (n, 3 * sizeof (Entry), &ok) ;
    b6 = KLU_mult_size_t (maxblock, 6 * sizeof (Int), &ok) ;
    Numeric->worksize = KLU_add_size_t (s, MAX (n3, b6), &ok) ;
    Numeric->Work = KLU_malloc (Numeric->worksize, 1, Common) ;
    Numeric->Xwork = Numeric->Work ;
    Numeric->Iwork = (Int *) ((Entry *) Numeric->Xwork + n) ;
    if (!ok || Common->status < KLU_OK)
    {
        /* out of memory or problem too large */
        Common->status = ok ? KLU_OUT_OF_MEMORY : KLU_TOO_LARGE ;
        KLU_free_numeric (&Numeric, Common) ;
        return (NULL) ;
    }

    /* ---------------------------------------------------------------------- */
    /* factorize the blocks */
    /* ---------------------------------------------------------------------- */

    factor2 (Ap, Ai, (Entry *) Ax, Symbolic, Numeric, Common) ;

    /* ---------------------------------------------------------------------- */
    /* return or free the Numeric object */
    /* ---------------------------------------------------------------------- */

    if (Common->status < KLU_OK)
    {
        /* out of memory or inputs invalid */
        KLU_free_numeric (&Numeric, Common) ;
    }
    else if (Common->status == KLU_SINGULAR)
    {
        if (Common->halt_if_singular)
        {
            /* Matrix is singular, and the Numeric object is only partially
             * defined because we halted early.  This is the default case for
             * a singular matrix. */
            KLU_free_numeric (&Numeric, Common) ;
        }
    }
    else if (Common->status == KLU_OK)
    {
        /* successful non-singular factorization */
        Common->numerical_rank = n ;
        Common->singular_col = n ;
    }
    return (Numeric) ;
}

#endif