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* @file Event.h
* @brief Definitions of Event and ListOfEvents.
* @author Ben Bornstein
*
* <!--------------------------------------------------------------------------
* This file is part of libSBML. Please visit http://sbml.org for more
* information about SBML, and the latest version of libSBML.
*
* Copyright (C) 2013-2016 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
* 3. University of Heidelberg, Heidelberg, Germany
*
* Copyright (C) 2009-2013 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
*
* Copyright (C) 2006-2008 by the California Institute of Technology,
* Pasadena, CA, USA
*
* Copyright (C) 2002-2005 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. Japan Science and Technology Agency, Japan
*
* This library is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation. A copy of the license agreement is provided
* in the file named "LICENSE.txt" included with this software distribution
* and also available online as http://sbml.org/software/libsbml/license.html
* ------------------------------------------------------------------------ -->
*
* @class Event
* @sbmlbrief{core} A discontinuous SBML <em>event</em>.
*
* An SBML Event object defines when the event can occur, the variables
* that are affected by it, how the variables are affected, and the event's
* relationship to other events. The effect of the event can optionally be
* delayed after the occurrence of the condition which invokes it.
*
* The operation of Event is divided into two phases (even when the event
* is not delayed): one when the event is @em triggered, and the other when
* the event is @em executed. Trigger objects define the conditions for
* triggering an event, Delay objects define when the event is actually
* executed, EventAssignment objects define the effects of executing the
* event, and (in SBML Level 3) Priority objects influence the order
* of EventAssignment performance in cases of simultaneous events. Please
* consult the descriptions of Trigger, Delay, EventAssignment and Priority
* for more information.
*
* @section event-version-diffs SBML Level/Version differences
*
* @subsection sbml-l3 SBML Level 3
*
* SBML Level 3 introduces several changes to the structure and components
* of Events compared to SBML Level 2. These changes fall into two
* main categories: changes to what is optional or required, and additions
* of new attributes and elements.
* <ul>
* <li> The attribute "useValuesFromTriggerTime" on Event is mandatory (it
* was optional in Level 2);
* <li> Event's "listOfEventAssignments" element (of class
* ListOfEventAssignments) is optional (it was mandatory in Level 2);
* <li> Event's "priority" element (of class Priority) is new in
* Level 3; and
* <li> The Trigger object gains new mandatory attributes (described as part
* of the definition of Trigger).
* </ul>
*
* The changes to the attributes of Event are described below; the changes
* to Trigger and Priority are described in their respective sections.
*
* @subsection sbml-l2 SBML Level 2
*
* In SBML Level 2 versions before Version 4, the semantics of
* Event time delays were defined such that the expressions in the event's
* assignments were always evaluated at the time the event was
* <em>triggered</em>. This definition made it difficult to define an event
* whose assignment formulas were meant to be evaluated at the time the
* event was <em>executed</em> (i.e., after the time period defined by the
* value of the Delay element). In SBML Level 2 Version 4 and in
* Level 3, the attribute "useValuesFromTriggerTime" on Event allows a
* model to indicate the time at which the event's assignments are intended
* the values of the assignment formulas are computed at the moment the
* event is triggered, not after the delay. If "useValuesFromTriggerTime"=@c
* false, it means that the formulas in the event's assignments are to be
* computed @em after the delay, at the time the event is executed.
*
* The definition of Event in SBML Level 2 Versions 1 and 2 includes
* an additional attribute called "timeUnits", which allowed the time units
* of the Delay to be set explicitly. Later Versions of SBML Level 2
* as well as SBML Level 3 do not define this attribute. LibSBML
* supports this attribute for compatibility with previous versions of SBML
* Level 2; however, if a model in SBML Level 3 or Level 2
* Versions 3–4 format sets the attribute, the
* consistency-checking method SBMLDocument::checkConsistency() will report
* an error.
*
* The attribute "useValuesFromTriggerTime" was introduced in SBML
* Level 2 Version 4. Models defined in prior Versions of SBML
* Level 2 cannot use this attribute, and
* SBMLDocument::checkConsistency() will report an error if they do.
*
* @section semantics Semantics of events in SBML Level 3 Version 1
*
* The detailed semantics of events are described in the specification
* documents for each SBML Level/Version. Here we include the description
* from the SBML Level 1 Version 1.
* Any transition of a Trigger object's "math" formula from the value @c
* false to @c true will cause the enclosing Event object to
* <em>trigger</em>. Such a transition is not possible at the very start
* of a simulation (i.e., at time <em>t = 0</em>) unless the Trigger
* object's "initialValue" attribute has a value of @c false; this defines
* the value of the trigger formula to be @c false immediately prior to the
* start of simulation, thereby giving it the potential to change in value
* from @c false to @c true when the formula is evaluated at <em>t =
* 0</em>. If "initialValue"=@c true, then the trigger expression cannot
* transition from @c false to @c true at <em>t = 0</em> but may do so at
* some time <em>t > 0</em>.
*
* Consider an Event object definition <EM>E</EM> with delay <em>d</em> in
* which the Trigger object's "math" formula makes a transition in value
* from @c false to @c true at times <em>t<sub>1</sub></em> and
* <em>t<sub>2</sub></em>. The EventAssignment within the Event object
* will have effect at <em>t<sub>1</sub> + d</em> and
* <em>t<sub>2</sub> + d</em> irrespective of the relative times of
* <em>t<sub>1</sub></em> and <em>t<sub>2</sub></em>. For example, events
* can "overlap" so that <em>t<sub>1</sub> < t<sub>2</sub> <
* t<sub>1</sub> + d</em> still causes an event assignments to occur at
* <em>t<sub>1</sub> + d</em> and <em>t<sub>2</sub> + d</em>.
*
* It is entirely possible for two events to be executed simultaneously,
* and it is possible for events to trigger other events (i.e., an event
* assignment can cause an event to trigger). This leads to several
* points:
* <ul>
*
* <li> A software package should retest all event triggers after executing
* an event assignment in order to account for the possibility that the
* assignment causes another event trigger to transition from @c false to
* @c true. This check should be made after each individual Event object's
* execution, even when several events are to be executed simultaneously.
*
* <li> Any Event object whose Trigger "persistent" attribute has the value
* @c false must have its trigger expression reevaluated continuously
* between when the event is triggered and when it is executed. If
* its trigger expression ever evaluates to @c false, it must be removed
* from the queue of events pending execution and treated as any other
* event whose trigger expression evaluates to @c false.
*
* <li> Although the precise time at which events are executed is not
* resolved beyond the given execution point in simulated time, it is
* assumed that the order in which the events occur <em>is</em> resolved.
* This order can be significant in determining the overall outcome of a
* given simulation. When an event <EM>X</EM> <em>triggers</em> another
* event <EM>Y</EM> and event <EM>Y</EM> has zero delay, then event
* <EM>Y</EM> is added to the existing set of simultaneous events that are
* pending <em>execution</em>. Events <EM>X</EM> and <EM>Y</EM> form a
* cascade of events at the same point in simulation time. An event such
* as <EM>Y</EM> may have a special priority if it contains a Priority
* subobject.
*
* <li> All events in a model are open to being in a cascade. The position
* of an event in the event queue does not affect whether it can be in the
* cascade: event <EM>Y</EM> can be triggered whether it is before or after
* <EM>X</EM> in the queue of events pending execution. A cascade of
* events can be potentially infinite (never terminate); when this occurs a
* simulator should indicate this has occurred---it is incorrect for a
* simulator to break a cascade arbitrarily and continue the simulation
* without at least indicating that the infinite cascade occurred.
*
* <li> Simultaneous events having no defined priorities are executed in an
* undefined order. This does not mean that the behavior of the simulation
* is completely undefined; merely that the <em>order</em> of execution of
* these particular events is undefined. A given simulator may use any
* algorithm to choose an order as long as every event is executed exactly
* once.
*
* <li> Events with defined priorities are executed in the order implied by
* their Priority "math" formula values, with events having higher
* priorities being executed ahead of events with lower priorities, and
* events with identical priorities being executed in a random order with
* respect to one another (as determined at run-time by some random
* algorithm equivalent to coin-flipping). Newly-triggered events that are
* to be executed immediately (i.e., if they define no delays) should be
* inserted into the queue of events pending execution according to their
* priorities: events with higher priority values value must be inserted
* ahead of events with lower priority values and after any pending events
* with even higher priorities, and inserted randomly among pending events
* with the same priority values. Events without Priority objects must be
* inserted into the queue in some fashion, but the algorithm used to place
* it in the queue is undefined. Similarly, there is no restriction on the
* order of a newly-inserted event with a defined Priority with respect to
* any other pending Event without a defined Priority.
*
* <li> A model variable that is the target of one or more event
* assignments can change more than once when simultaneous events are
* processed at some time point <em>t</em>. The model's behavior (output)
* for such a variable is the value of the variable at the end of
* processing all the simultaneous events at time <em>t</em>.
*
* </ul>
*
* @see Trigger
* @see Priority
* @see Delay
* @see EventAssignment
*
*
* <!-- ------------------------------------------------------------------- -->
* @class ListOfEvents
* @sbmlbrief{core} A list of Event objects.
*
* @copydetails doc_what_is_listof
*/
/**
* <!-- ~ ~ ~ ~ ~ Start of common documentation strings ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~
* The following text is used as common documentation blocks copied multiple
* times elsewhere in this file. The use of @class is a hack needed because
* Doxygen's @copydetails command has limited functionality. Symbols
* beginning with "doc_" are marked as ignored in our Doxygen configuration.
* ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ -->
*
* @class doc_warning_event_timeUnits
*
* @warning <span class="warning">Definitions of Event in SBML Level 2
* Versions 1 and 2 included the additional attribute called
* "timeUnits", but it was removed in SBML Level 2 Version 3.
* LibSBML supports this attribute for compatibility with previous versions
* of SBML Level 2, but its use is discouraged since models in
* Level 2 Versions 3 and 4 cannot contain it. If a
* Version 3 or 4 model sets the attribute, the
* consistency-checking method SBMLDocument::checkConsistency() will report
* an error.</span>
*
* @class doc_warning_useValuesFromTriggerTime
*
* @warning <span class="warning">The attribute "useValuesFromTriggerTime"
* was introduced in SBML Level 2 Version 4. It is not valid in
* models defined using SBML Level 2 versions prior to Version 4.
* If a Level 2 Version 1–3 model sets the attribute, the
* consistency-checking method SBMLDocument::checkConsistency() will report
* an error.</span>
*
* @class doc_event_using_useValuesFromTriggerTime
*
* @par
* The optional Delay on Event means there are two times to consider when
* computing the results of an event: the time at which the event is
* <em>triggered</em>, and the time at which assignments are
* <em>executed</em>. It is also possible to distinguish between the
* time at which the EventAssignment's expression is calculated, and the
* time at which the assignment is made: the expression could be
* evaluated at the same time the assignments are performed, i.e., when
* the event is <em>executed</em>, but it could also be defined to be
* evaluated at the time the event is <em>triggered</em>.
*
* In SBML Level 2 versions prior to Version 4, the semantics
* of Event time delays were defined such that the expressions in the
* event's assignments were always evaluated at the time the event was
* <em>triggered</em>. This definition made it difficult to define an
* event whose assignment formulas were meant to be evaluated at the time
* the event was <em>executed</em> (i.e., after the time period defined
* by the value of the Delay element). In SBML Level 2
* Version 4, the attribute "useValuesFromTriggerTime" on Event
* allows a model to indicate the time at which the event's assignments
* are intended to be evaluated. In SBML Level 2, the attribute has
* a default value of @c true, which corresponds to the interpretation of
* event assignments prior to Version 4: the values of the
* assignment formulas are computed at the moment the event is triggered,
* not after the delay. If "useValuesFromTriggerTime"=@c false, it means
* that the formulas in the event's assignments are to be computed after
* the delay, at the time the event is executed. In SBML Level 3,
* the attribute is mandatory, not optional, and all events must specify
* a value for it.
*
*/
#ifndef Event_h
#define Event_h
#include <sbml/common/extern.h>
#include <sbml/common/sbmlfwd.h>
#ifdef __cplusplus
#include <string>
#include <sbml/SBase.h>
#include <sbml/ListOf.h>
#include <sbml/EventAssignment.h>
#include <sbml/Trigger.h>
#include <sbml/Delay.h>
#include <sbml/Priority.h>
LIBSBML_CPP_NAMESPACE_BEGIN
class ASTNode;
class SBMLVisitor;
class LIBSBML_EXTERN Event : public SBase
{
public:
/**
* Creates a new Event using the given SBML @p level and @p version
* values.
*
* @param level an unsigned int, the SBML Level to assign to this Event
*
* @param version an unsigned int, the SBML Version to assign to this
* Event
*
* @copydetails doc_throw_exception_lv
*
* @copydetails doc_note_setting_lv
*/
Event (unsigned int level, unsigned int version);
/**
* Creates a new Event using the given SBMLNamespaces object
* @p sbmlns.
*
* @copydetails doc_what_are_sbmlnamespaces
*
* @param sbmlns an SBMLNamespaces object.
*
* @copydetails doc_throw_exception_namespace
*
* @copydetails doc_note_setting_lv
*/
Event (SBMLNamespaces* sbmlns);
/**
* Destroys this Event.
*/
virtual ~Event ();
/**
* Copy constructor; creates a copy of this Event.
*
* @param orig the object to copy.
*/
Event (const Event& orig);
/**
* Assignment operator for Event.
*
* @param rhs The object whose values are used as the basis of the
* assignment.
*/
Event& operator=(const Event& rhs);
/** @cond doxygenLibsbmlInternal */
/**
* Accepts the given SBMLVisitor for this instance of Event.
*
* @param v the SBMLVisitor instance to be used.
*
* @return the result of calling <code>v.visit()</code>, which indicates
* whether the Visitor would like to visit the next Event in the list
* of events within which this Event is embedded.
*/
virtual bool accept (SBMLVisitor& v) const;
/** @endcond */
/**
* Creates and returns a deep copy of this Event object.
*
* @return the (deep) copy of this Event object.
*/
virtual Event* clone () const;
/**
* Initializes the fields of this Event object to "typical" default
* values.
*
* The SBML Event component has slightly different aspects and
* default attribute values in different SBML Levels and Versions.
* This method sets the values to certain common defaults, based
* mostly on what they are in SBML Level 2. Specifically:
*
* @li Sets attribute "spatialDimensions" to @c 3
*/
void initDefaults ();
/**
* Returns the first child element found that has the given @p id in the
* model-wide SId namespace, or @c NULL if no such object is found.
*
* @param id string representing the id of objects to find
*
* @return pointer to the first element found with the given @p id.
*/
virtual SBase* getElementBySId(const std::string& id);
/**
* Returns the first child element it can find with the given @p metaid, or
* @c NULL if no such object is found.
*
* @param metaid string representing the metaid of objects to find
*
* @return pointer to the first element found with the given @p metaid.
*/
virtual SBase* getElementByMetaId(const std::string& metaid);
/**
* Returns a List of all child SBase objects, including those nested to an
* arbitrary depth.
*
* @return a List of pointers to all children objects.
*/
virtual List* getAllElements(ElementFilter* filter=NULL);
/**
* Returns the value of the "id" attribute of this Event.
*
* @return the id of this Event.
*/
virtual const std::string& getId () const;
/**
* Returns the value of the "name" attribute of this Event.
*
* @return the name of this Event.
*/
virtual const std::string& getName () const;
/**
* Get the event trigger portion of this Event.
*
* @return the Trigger object of this Event.
*/
const Trigger* getTrigger () const;
/**
* Get the event trigger portion of this Event.
*
* @return the Trigger object of this Event.
*/
Trigger* getTrigger ();
/**
* Get the assignment delay portion of this Event, if there is one.
*
* @return the delay of this Event if one is defined, or @c NULL if none
* is defined.
*/
const Delay* getDelay () const;
/**
* Get the assignment delay portion of this Event, if there is one.
*
* @return the delay of this Event if one is defined, or @c NULL if none
* is defined.
*/
Delay* getDelay ();
/**
* (SBML Level 3 only) Get the event priority portion of this
* Event.
*
* @return the Priority object of this Event.
*
* @note The element "priority" is available in SBML Level 3
* Version 1 Core, but is not present in lower Levels of SBML.
*/
const Priority* getPriority () const;
/**
* (SBML Level 3 only) Get the event priority portion of this
* Event.
*
* @return the Priority object of this Event.
*
* @note The element "priority" is available in SBML Level 3
* Version 1 Core, but is not present in lower Levels of SBML.
*/
Priority* getPriority ();
/**
* Get the value of the "timeUnits" attribute of this Event, if it has one.
*
* @return the value of the attribute "timeUnits" as a string.
*
* @copydetails doc_warning_event_timeUnits
*/
const std::string& getTimeUnits () const;
/**
* Get the value of the "useValuesFromTriggerTime" attribute of this Event.
*
* @copydetails doc_event_using_useValuesFromTriggerTime
*
* @return the value of the attribute "useValuesFromTriggerTime" as a boolean.
*
* @copydetails doc_warning_useValuesFromTriggerTime
*/
bool getUseValuesFromTriggerTime () const;
/**
* Predicate returning @c true if this
* Event's "id" attribute is set.
*
* @return @c true if the "id" attribute of this Event is
* set, @c false otherwise.
*/
virtual bool isSetId () const;
/**
* Predicate returning @c true if this
* Event's "name" attribute is set.
*
* @return @c true if the "name" attribute of this Event is
* set, @c false otherwise.
*/
virtual bool isSetName () const;
/**
* Predicate for testing whether the trigger for this Event is set.
*
* @return @c true if the trigger of this Event is set, @c false
* otherwise.
*/
bool isSetTrigger () const;
/**
* Predicate for testing whether the delay for this Event is set.
*
* @return @c true if the delay of this Event is set, @c false
* otherwise.
*/
bool isSetDelay () const;
/**
* (SBML Level 3 only) Predicate for testing whether the priority
* for this Event is set.
*
* @return @c true if the priority of this Event is set, @c false
* otherwise.
*
* @note The element "priority" is available in SBML Level 3
* Version 1 Core, but is not present in lower Levels of SBML.
*/
bool isSetPriority () const;
/**
* Predicate for testing whether the "timeUnits" attribute of this Event
* is set.
*
* @return @c true if the "timeUnits" attribute of this Event is
* set, @c false otherwise.
*
* @copydetails doc_warning_event_timeUnits
*/
bool isSetTimeUnits () const;
/**
* Predicate for testing whether the "useValuesFromTriggerTime" attribute of this Event
* is set.
*
* @return @c true if the "useValuesFromTriggerTime" attribute of this Event is
* set, @c false otherwise.
*
* @note In SBML Level 2, this attribute is optional and has a default value of
* @c true, whereas in Level 3 Version 1, this optional is mandatory and
* has no default value.
*/
bool isSetUseValuesFromTriggerTime () const;
/**
* Sets the value of the "id" attribute of this Event.
*
* The string @p sid is copied.
*
* @copydetails doc_id_syntax
*
* @param sid the string to use as the identifier of this Event
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_INVALID_ATTRIBUTE_VALUE, OperationReturnValues_t}
*/
virtual int setId (const std::string& sid);
/**
* Sets the value of the "name" attribute of this Event.
*
* The string in @p name is copied.
*
* @param name the new name for the Event
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_INVALID_ATTRIBUTE_VALUE, OperationReturnValues_t}
*/
virtual int setName (const std::string& name);
/**
* Sets the trigger definition of this Event to a copy of the given
* Trigger object instance.
*
* @param trigger the Trigger object instance to use.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
*/
int setTrigger (const Trigger* trigger);
/**
* Sets the delay definition of this Event to a copy of the given Delay
* object instance.
*
* @param delay the Delay object instance to use
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
*/
int setDelay (const Delay* delay);
/**
* (SBML Level 3 only) Sets the priority definition of this Event
* to a copy of the given Priority object instance.
*
* @param priority the Priority object instance to use
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_UNEXPECTED_ATTRIBUTE, OperationReturnValues_t}
*
* @note The element "priority" is available in SBML Level 3
* Version 1 Core, but is not present in lower Levels of SBML.
*/
int setPriority (const Priority* priority);
/**
* Sets the "timeUnits" attribute of this Event to a copy of @p sid.
*
* @param sid the identifier of the time units to use.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_INVALID_ATTRIBUTE_VALUE, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_UNEXPECTED_ATTRIBUTE, OperationReturnValues_t}
*
* @copydetails doc_warning_event_timeUnits
*
*/
int setTimeUnits (const std::string& sid);
/**
* Sets the "useValuesFromTriggerTime" attribute of this Event to a @p value.
*
* @copydetails doc_event_using_useValuesFromTriggerTime
*
* @param value the value of useValuesFromTriggerTime to use.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_UNEXPECTED_ATTRIBUTE, OperationReturnValues_t}
*
* @copydetails doc_warning_useValuesFromTriggerTime
*/
int setUseValuesFromTriggerTime (bool value);
/**
* Unsets the value of the "id" attribute of this Event.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*/
virtual int unsetId ();
/**
* Unsets the value of the "name" attribute of this Event.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*/
virtual int unsetName ();
/**
* Unsets the value of the "useValuesFromTriggerTime" attribute of this Event.
*
* @copydetails doc_event_using_useValuesFromTriggerTime
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @copydetails doc_warning_useValuesFromTriggerTime
*/
int unsetUseValuesFromTriggerTime ();
/**
* Unsets the Delay of this Event.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*/
int unsetDelay ();
/**
* (SBML Level 3 only) Unsets the Priority of this Event.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @note The element "priority" is available in SBML Level 3
* Version 1 Core, but is not present in lower Levels of SBML.
*/
int unsetPriority ();
/**
* Unsets the Trigger of this Event.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @note The element "priority" is available in SBML Level 3
* Version 1 Core, but is not present in lower Levels of SBML.
*/
int unsetTrigger();
/**
* Unsets the "timeUnits" attribute of this Event.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_UNEXPECTED_ATTRIBUTE, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @copydetails doc_warning_event_timeUnits
*/
int unsetTimeUnits ();
/**
* Appends a copy of the given EventAssignment to this Event.
*
* @param ea the EventAssignment object to add.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_DUPLICATE_OBJECT_ID, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @copydetails doc_note_object_is_copied
*
* @see createEventAssignment()
*/
int addEventAssignment (const EventAssignment* ea);
/**
* Creates a new, empty EventAssignment, adds it to this Event's list of
* event assignments and returns the EventAssignment.
*
* @return the newly created EventAssignment object instance
*
* @see addEventAssignment(const EventAssignment* ea)
*/
EventAssignment* createEventAssignment ();
/**
* Creates a new, empty Trigger, adds it to this Event and
* returns the Trigger.
*
* @return the newly created Trigger object instance
*/
Trigger* createTrigger ();
/**
* Creates a new, empty Delay, adds it to this Event and
* returns the Delay.
*
* @return the newly created Delay object instance
*/
Delay* createDelay ();
/**
* (SBML Level 3 only) Creates a new, empty Priority, adds it to this
* Event and returns the Priority.
*
* @return the newly created Priority object instance
*
* @note The element "priority" is available in SBML Level 3
* Version 1 Core, but is not present in lower Levels of SBML.
*/
Priority* createPriority ();
/**
* Returns the list of event assignments for this Event.
*
* @return the list of EventAssignments for this Event.
*/
const ListOfEventAssignments* getListOfEventAssignments () const;
/**
* Returns the list of event assignments for this Event.
*
* @return the list of EventAssignments for this Event.
*/
ListOfEventAssignments* getListOfEventAssignments ();
/**
* Return a specific EventAssignment object of this Event.
*
* @param n an integer, the index of the EventAssignment object to return
*
* @return the <code>n</code>th EventAssignment of this Event.
*/
const EventAssignment* getEventAssignment (unsigned int n) const;
/**
* Return a specific EventAssignment object of this Event.
*
* @param n an integer, the index of the EventAssignment object to return
*
* @return the <code>n</code>th EventAssignment of this Event.
*/
EventAssignment* getEventAssignment (unsigned int n);
/**
* Return the event assignment indicated by the given @p variable.
*
* @param variable a string, the identifier of the variable whose
* EventAssignment is being sought.
*
* @return the EventAssignment for the given @p variable, or @c NULL if
* no such EventAssignment exits.
*/
const EventAssignment* getEventAssignment (const std::string& variable) const;
/**
* Return the event assignment indicated by the given @p variable.
*
* @param variable a string, the identifier of the variable whose
* EventAssignment is being sought.
*
* @return the EventAssignment for the given @p variable, or @c NULL if
* no such EventAssignment exits.
*/
EventAssignment* getEventAssignment (const std::string& variable);
/**
* Returns the number of EventAssignment objects attached to this
* Event.
*
* @return the number of EventAssignments in this Event.
*/
unsigned int getNumEventAssignments () const;
/**
* Removes the nth EventAssignment object from this Event object and
* returns a pointer to it.
*
* The caller owns the returned object and is responsible for deleting it.
*
* @param n the index of the EventAssignment object to remove
*
* @return the EventAssignment object removed. As mentioned above,
* the caller owns the returned item. @c NULL is returned if the given index
* is out of range.
*
*/
EventAssignment* removeEventAssignment (unsigned int n);
/**
* Removes the EventAssignment object with the given "variable" attribute
* from this Event object and returns a pointer to it.
*
* The caller owns the returned object and is responsible for deleting it.
* If none of the EventAssignment objects in this Event object have the
* "variable" attribute @p variable, then @c NULL is returned.
*
* @param variable the "variable" attribute of the EventAssignment object
* to remove
*
* @return the EventAssignment object removed. As mentioned above, the
* caller owns the returned object. @c NULL is returned if no EventAssignment
* object with the "variable" attribute exists in this Event object.
*/
EventAssignment* removeEventAssignment (const std::string& variable);
/** @cond doxygenLibsbmlInternal */
/**
* Sets the parent SBMLDocument of this SBML object.
*
* @param d the SBMLDocument to use
*/
virtual void setSBMLDocument (SBMLDocument* d);
/**
* Sets this SBML object to child SBML objects (if any).
* (Creates a child-parent relationship by the parent)
*
* Subclasses must override this function if they define
* one ore more child elements.
* Basically, this function needs to be called in
* constructor, copy constructor and assignment operator.
*
* @see setSBMLDocument
* @see enablePackageInternal
*/
virtual void connectToChild ();
/**
* Enables/Disables the given package with this element and child
* elements (if any).
* (This is an internal implementation for enablePackage function)
*
* @note Subclasses of the SBML Core package in which one or more child
* elements are defined must override this function.
*/
virtual void enablePackageInternal(const std::string& pkgURI,
const std::string& pkgPrefix, bool flag);
/** @endcond */
/**
* Returns the libSBML type code of this object instance.
*
* @copydetails doc_what_are_typecodes
*
* @return the SBML type code for this object:
* @sbmlconstant{SBML_EVENT, SBMLTypeCode_t} (default).
*
* @copydetails doc_warning_typecodes_not_unique
*
* @see getElementName()
* @see getPackageName()
*/
virtual int getTypeCode () const;
/**
* Returns the XML element name of this object, which for Event, is
* always @c "event".
*
* @return the name of this element, i.e., @c "event".
*/
virtual const std::string& getElementName () const;
/** @cond doxygenLibsbmlInternal */
/**
* Subclasses should override this method to write out their contained
* SBML objects as XML elements. Be sure to call your parents
* implementation of this method as well.
*/
virtual void writeElements (XMLOutputStream& stream) const;
/** @endcond */
/** @cond doxygenLibsbmlInternal */
/**
* sets the mInternalIdOnly flag
*/
void setInternalIdOnly();
/** @endcond */
/**
* Predicate returning @c true if all the required attributes for this
* Event object have been set.
*
* The required attributes for an Event object are:
* @li "useValuesfromTriggerTime" (required in SBML Level 3)
*
* @return @c true if the required attributes have been set, @c false
* otherwise.
*/
virtual bool hasRequiredAttributes() const;
/**
* Predicate returning @c true if all the required elements for this Event
* object have been set.
*
* @note The required elements for an Event object are:
* @li "trigger"
* @li "listOfEventAssignments" (required in SBML Level 2, optional in Level 3)
*/
virtual bool hasRequiredElements() const;
protected:
/** @cond doxygenLibsbmlInternal */
/**
* Create and return an SBML object of this class, if present.
*
* @return the SBML object corresponding to next XMLToken in the
* XMLInputStream or @c NULL if the token was not recognized.
*/
virtual SBase* createObject (XMLInputStream& stream);
/**
* Subclasses should override this method to get the list of
* expected attributes.
* This function is invoked from corresponding readAttributes()
* function.
*/
virtual void addExpectedAttributes(ExpectedAttributes& attributes);
/**
* Subclasses should override this method to read values from the given
* XMLAttributes set into their specific fields. Be sure to call your
* parents implementation of this method as well.
*/
virtual void readAttributes (const XMLAttributes& attributes,
const ExpectedAttributes& expectedAttributes);
void readL2Attributes (const XMLAttributes& attributes);
void readL3Attributes (const XMLAttributes& attributes);
/**
* Subclasses should override this method to write their XML attributes
* to the XMLOutputStream. Be sure to call your parents implementation
* of this method as well.
*/
virtual void writeAttributes (XMLOutputStream& stream) const;
bool isExplicitlySetUVFTT() const { return mExplicitlySetUVFTT; } ;
std::string mId;
std::string mName;
Trigger* mTrigger;
Delay* mDelay;
Priority* mPriority;
std::string mTimeUnits;
bool mUseValuesFromTriggerTime;
bool mIsSetUseValuesFromTriggerTime;
bool mInternalIdOnly;
bool mExplicitlySetUVFTT;
ListOfEventAssignments mEventAssignments;
/* the validator classes need to be friends to access the
* protected constructor that takes no arguments
*/
friend class Validator;
friend class ConsistencyValidator;
friend class IdentifierConsistencyValidator;
friend class InternalConsistencyValidator;
friend class L1CompatibilityValidator;
friend class L2v1CompatibilityValidator;
friend class L2v2CompatibilityValidator;
friend class L2v3CompatibilityValidator;
friend class L2v4CompatibilityValidator;
friend class L3v1CompatibilityValidator;
friend class MathMLConsistencyValidator;
friend class ModelingPracticeValidator;
friend class OverdeterminedValidator;
friend class SBOConsistencyValidator;
friend class UnitConsistencyValidator;
/** @endcond */
};
class LIBSBML_EXTERN ListOfEvents : public ListOf
{
public:
/**
* Creates a new ListOfEvents object.
*
* The object is constructed such that it is valid for the given SBML
* Level and Version combination.
*
* @param level the SBML Level
*
* @param version the Version within the SBML Level
*
* @copydetails doc_throw_exception_lv
*
* @copydetails doc_note_setting_lv
*/
ListOfEvents (unsigned int level, unsigned int version);
/**
* Creates a new ListOfEvents object.
*
* The object is constructed such that it is valid for the SBML Level and
* Version combination determined by the SBMLNamespaces object in @p
* sbmlns.
*
* @param sbmlns an SBMLNamespaces object that is used to determine the
* characteristics of the ListOfEvents object to be created.
*
* @copydetails doc_throw_exception_namespace
*
* @copydetails doc_note_setting_lv
*/
ListOfEvents (SBMLNamespaces* sbmlns);
/**
* Creates and returns a deep copy of this ListOfEvents object.
*
* @return the (deep) copy of this ListOfEvents object.
*/
virtual ListOfEvents* clone () const;
/**
* Returns the libSBML type code for the objects contained in this ListOf
* (i.e., Event objects, if the list is non-empty).
*
* @copydetails doc_what_are_typecodes
*
* @return the SBML type code for the objects contained in this ListOf:
* @sbmlconstant{SBML_EVENT, SBMLTypeCode_t} (default).
*
* @see getElementName()
* @see getPackageName()
*/
virtual int getItemTypeCode () const;
/**
* Returns the XML element name of this object.
*
* For ListOfEvents, the XML element name is @c "listOfEvents".
*
* @return the name of this element, i.e., @c "listOfEvents".
*/
virtual const std::string& getElementName () const;
/**
* Get an Event from the ListOfEvents.
*
* @param n the index number of the Event to get.
*
* @return the <code>n</code>th Event in this ListOfEvents.
*
* @see size()
*/
virtual Event * get(unsigned int n);
/**
* Get an Event from the ListOfEvents.
*
* @param n the index number of the Event to get.
*
* @return the <code>n</code>th Event in this ListOfEvents.
*
* @see size()
*/
virtual const Event * get(unsigned int n) const;
/**
* Get an Event from the ListOfEvents
* based on its identifier.
*
* @param sid a string representing the identifier
* of the Event to get.
*
* @return Event in this ListOfEvents
* with the given @p sid or @c NULL if no such
* Event exists.
*
* @see get(unsigned int n)
* @see size()
*/
virtual Event* get (const std::string& sid);
/**
* Get an Event from the ListOfEvents
* based on its identifier.
*
* @param sid a string representing the identifier
* of the Event to get.
*
* @return Event in this ListOfEvents
* with the given @p sid or @c NULL if no such
* Event exists.
*
* @see get(unsigned int n)
* @see size()
*/
virtual const Event* get (const std::string& sid) const;
/**
* Removes the nth item from this ListOfEvents items and returns a pointer to
* it.
*
* The caller owns the returned item and is responsible for deleting it.
*
* @param n the index of the item to remove
*
* @see size()
*/
virtual Event* remove (unsigned int n);
/**
* Removes item in this ListOfEvents items with the given identifier.
*
* The caller owns the returned item and is responsible for deleting it.
* If none of the items in this list have the identifier @p sid, then
* @c NULL is returned.
*
* @param sid the identifier of the item to remove
*
* @return the item removed. As mentioned above, the caller owns the
* returned item.
*/
virtual Event* remove (const std::string& sid);
/** @cond doxygenLibsbmlInternal */
/**
* Get the ordinal position of this element in the containing object
* (which in this case is the Model object).
*
* The ordering of elements in the XML form of SBML is generally fixed
* for most components in SBML. So, for example, the ListOfEvents in a
* model is (in SBML Level 2 Version 4) the twelfth ListOf___.
* (However, it differs for different Levels and Versions of SBML, so
* calling code should not hardwire this number.)
*
* @return the ordinal position of the element with respect to its
* siblings, or @c -1 (default) to indicate the position is not significant.
*/
virtual int getElementPosition () const;
/** @endcond */
protected:
/** @cond doxygenLibsbmlInternal */
/**
* Create and return an SBML object of this class, if present.
*
* @return the SBML object corresponding to next XMLToken in the
* XMLInputStream or @c NULL if the token was not recognized.
*/
virtual SBase* createObject (XMLInputStream& stream);
/** @endcond */
};
LIBSBML_CPP_NAMESPACE_END
#endif /* __cplusplus */
#ifndef SWIG
LIBSBML_CPP_NAMESPACE_BEGIN
BEGIN_C_DECLS
/* ----------------------------------------------------------------------------
* See the .cpp file for the documentation of the following functions.
* --------------------------------------------------------------------------*/
/**
* Creates a new Event_t structure using the given SBML @p level
* and @p version values.
*
* @param level an unsigned int, the SBML Level to assign to this
* Event_t
*
* @param version an unsigned int, the SBML Version to assign to this
* Event_t
*
* @return a pointer to the newly created Event_t structure.
*
* @note Once an Event_t has been added to an SBMLDocument_t, the @p
* level and @p version for the document @em override those used to create
* the Event_t. Despite this, the ability to supply the values at
* creation time is an important aid to creating valid SBML. Knowledge of
* the intended SBML Level and Version determine whether it is valid to
* assign a particular value to an attribute, or whether it is valid to add
* a structure to an existing SBMLDocument_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Event_t *
Event_create (unsigned int level, unsigned int version);
/**
* Creates a new Event_t structure using the given
* SBMLNamespaces_t structure.
*
* @param sbmlns SBMLNamespaces_t, a pointer to an SBMLNamespaces_t structure
* to assign to the given Event_t
*
* @return a pointer to the newly created Event_t structure.
*
* @note Once an Event_t has been added to an SBMLDocument_t, the
* @p sbmlns namespaces for the document @em override those used to create
* the Event_t. Despite this, the ability to supply the values at creation time
* is an important aid to creating valid SBML. Knowledge of the intended SBML
* Level and Version determine whether it is valid to assign a particular value
* to an attribute, or whether it is valid to add a structure to an existing
* SBMLDocument_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Event_t *
Event_createWithNS (SBMLNamespaces_t *sbmlns);
/**
* Frees the given Event_t structure.
*
* @param e the Event_t structure to free.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
void
Event_free (Event_t *e);
/**
* Returns a copy of the given Event_t structure.
*
* @param e the Event_t structure to copy.
*
* @return a (deep) copy of the Event_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Event_t *
Event_clone (const Event_t *e);
/**
* Returns a list of XMLNamespaces_t associated with the given Event_t
* structure.
*
* @param e the Event_t structure
*
* @return pointer to the XMLNamespaces_t structure associated with
* this structure
*
* @memberof Event_t
*/
LIBSBML_EXTERN
const XMLNamespaces_t *
Event_getNamespaces(Event_t *e);
/**
* Takes an Event_t structure and returns its identifier.
*
* @param e the Event_t structure whose identifier is sought
*
* @return the identifier of the given Event_t, as a pointer to a string.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
const char *
Event_getId (const Event_t *e);
/**
* Takes an Event_t structure and returns its name.
*
* @param e the Event_t whose name is sought.
*
* @return the name of the given Event_t, as a pointer to a string.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
const char *
Event_getName (const Event_t *e);
/**
* Takes an Event_t structure and returns its Trigger_t structure.
*
* @param e the Event_t structure whose trigger definition is sought.
*
* @return the Trigger_t of the given Event_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Trigger_t *
Event_getTrigger (Event_t *e);
/**
* Takes an Event_t structure and returns its Delay_t structure.
*
* @param e the Event_t structure whose delay definition is sought.
*
* @return the Delay_t of the given Event_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Delay_t *
Event_getDelay (Event_t *e);
/**
* Takes an Event_t structure and returns its Priority_t structure.
*
* @param e the Event_t structure whose delay definition is sought.
*
* @return the Priority_t of the given Event_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Priority_t *
Event_getPriority (Event_t *e);
/**
* Takes an Event_t structure and returns the value of its "timeUnits"
* attribute.
*
* @param e the Event_t structure whose "timeUnits" value is sought
*
* @return the timeUnits of the given Event_t
*
* @warning Definitions of Event_t in SBML Level 2 Versions 1 and 2
* included the additional attribute called "timeUnits", but it was
* removed in SBML Level 2 Version 3. LibSBML supports this attribute
* for compatibility with previous versions of SBML Level 2, but its use
* is discouraged since models in Level 2 Versions 3 and 4 cannot contain it.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
const char *
Event_getTimeUnits (const Event_t *e);
/**
* Takes an Event_t structure and returns the value of its "useValuesFromTriggerTime"
* attribute.
*
* @param e the Event_t structure whose "useValuesFromTriggerTime" value is sought
*
* @return the useValuesFromTriggerTime of the given Event_t
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_getUseValuesFromTriggerTime (const Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether the given
* Event_t structure's identifier is set.
*
* @param e the Event_t structure to query
*
* @return @c non-zero (true) if the "id" attribute of the given
* Event_t structure is set, zero (false) otherwise.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_isSetId (const Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether the given
* Event_t structure's name is set.
*
* @param e the Event_t structure to query
*
* @return @c non-zero (true) if the "name" attribute of the given
* Event_t structure is set, zero (false) otherwise.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_isSetName (const Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether the given
* Event_t structure's trigger is set.
*
* @param e the Event_t structure to query
*
* @return @c non-zero (true) if a Trigger_t structure is assigned to
* the given Event_t structure, zero (false) otherwise.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_isSetTrigger (const Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether the given
* Event_t structure's delay is set.
*
* @param e the Event_t structure to query
*
* @return @c non-zero (true) if a Delay_t structure is assigned to
* the given Event_t structure, zero (false) otherwise.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_isSetDelay (const Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether the given
* Event_t structure's priority is set.
*
* @param e the Event_t structure to query
*
* @return @c non-zero (true) if a Priority_t structure is assigned to
* the given Event_t structure, zero (false) otherwise.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_isSetPriority (const Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether the given
* Event_t structure's "timeUnits" attribute is set.
*
* @param e the Event_t structure to query
*
* @return @c non-zero (true) if a value for the "timeUnits" attribute is
* assigned in the given Event_t structure, zero (false) otherwise.
*
* @warning Definitions of Event_t in SBML Level 2 Versions 1 and 2
* included the additional attribute called "timeUnits", but it was
* removed in SBML Level 2 Version 3. LibSBML supports this attribute
* for compatibility with previous versions of SBML Level 2, but its use
* is discouraged since models in Level 2 Versions 3 and 4 cannot contain it.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_isSetTimeUnits (const Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether the given
* Event_t structure's useValuesFromTriggerTime attribute is set.
*
* @param e the Event_t structure to query
*
* @return @c non-zero (true) if the "useValuesFromTriggerTime" attribute of the given
* Event_t structure is set, zero (false) otherwise.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_isSetUseValuesFromTriggerTime (const Event_t *e);
/**
* Assigns the identifier of an Event_t structure.
*
* This makes a copy of the string passed in the param @p sid.
*
* @param e the Event_t structure to set.
* @param sid the string to use as the identifier.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_INVALID_ATTRIBUTE_VALUE, OperationReturnValues_t}
*
* @note Using this function with an id of NULL is equivalent to
* unsetting the "id" attribute.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_setId (Event_t *e, const char *sid);
/**
* Sets the name of the given Event_t to a copy of @p name.
*
* @param e the Event_t structure to set
* @param name the name to assign to the given Event_t's "name" attribute.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_INVALID_ATTRIBUTE_VALUE, OperationReturnValues_t}
*
* @note Using this function with the name set to NULL is equivalent to
* unsetting the "name" attribute.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_setName (Event_t *e, const char *name);
/**
* Sets the trigger of the given Event_t to a copy of the given Trigger_t.
*
* @param e the Event_t structure to set
* @param trigger the Trigger_t structure to use.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_setTrigger (Event_t *e, const Trigger_t *trigger);
/**
* Sets the delay of the given Event_t to a copy of the given Delay_t.
*
* @param e the Event_t structure to set
* @param delay the Delay_t structure to use.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_setDelay (Event_t *e, const Delay_t *delay);
/**
* Sets the priority of the given Event_t to a copy of the given Priority_t.
*
* @param e the Event_t structure to set
* @param priority the Priority_t structure to use.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_UNEXPECTED_ATTRIBUTE, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_setPriority (Event_t *e, const Priority_t *priority);
/**
* Sets the "timeUnits" attribute of the given Event_t to a copy of @p sid.
*
* @param e the Event_t structure to set
* @param sid the identifier of the units to use as the value of the
* "timeUnits" attribute
*
* @warning Definitions of Event_t in SBML Level 2 Versions 1 and 2
* included the additional attribute called "timeUnits", but it was
* removed in SBML Level 2 Version 3. LibSBML supports this attribute
* for compatibility with previous versions of SBML Level 2, but its use
* is discouraged since models in Level 2 Versions 3 and 4 cannot contain it.
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_INVALID_ATTRIBUTE_VALUE, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_UNEXPECTED_ATTRIBUTE, OperationReturnValues_t}
*
* @note Using this function with an id of NULL is equivalent to
* unsetting the "timeUnits" attribute.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_setTimeUnits (Event_t *e, const char *sid);
/**
* Sets the "useValuesFromTriggerTime" attribute of the given Event_t to a @p value.
*
* @param e the Event_t structure to set
* @param value the value of the "useValuesFromTriggerTime" attribute
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_UNEXPECTED_ATTRIBUTE, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_setUseValuesFromTriggerTime (Event_t *e, int value);
/**
* Unsets the "id" attribute of the given Event_t structure.
*
* @param e the Event_t structure to unset
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_unsetId (Event_t *e);
/**
* Unsets the "name" attribute of the given Event_t structure.
*
* @param e the Event_t structure to unset
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_unsetName (Event_t *e);
/**
* Unsets the "useValuesFromTriggerTime" attribute of the given Event_t structure.
*
* @param e the Event_t structure to unset
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_unsetUseValuesFromTriggerTime (Event_t *e);
/**
* Unsets the delay of the given Event_t.
*
* @param e the Event_t structure to unset
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_unsetDelay (Event_t *e);
/**
* Unsets the priority of the given Event_t.
*
* @param e the Event_t structure to unset
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_unsetPriority (Event_t *e);
/**
* Unsets the "timeUnits" attribute of the given Event_t.
*
* @param e the Event_t structure to unset
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @warning Definitions of Event_t in SBML Level 2 Versions 1 and 2
* included the additional attribute called "timeUnits", but it was
* removed in SBML Level 2 Version 3. LibSBML supports this attribute
* for compatibility with previous versions of SBML Level 2, but its use
* is discouraged since models in Level 2 Versions 3 and 4 cannot contain it.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_unsetTimeUnits (Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether
* all the required attributes for the given Event_t structure
* have been set.
*
* The required attributes for an Event_t structure are:
* @li useValuesfromTriggerTime ( L3 onwards )
*
* @return @c 1 if the required attributes have been set, @c 0
* otherwise.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_hasRequiredAttributes (Event_t *e);
/**
* Predicate returning @c true or @c false depending on whether
* all the required elements for the given Event_t structure
* have been set.
*
* @note The required elements for an Event_t structure are:
* @li trigger
* @li listOfEventAssignments (requirement removed in L3)
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_hasRequiredElements (Event_t *e);
/**
* Appends a copy of the given EventAssignment_t structure to the given Event_t
* structure.
*
* @param e the Event_t structure to which the EventAssignment_t should be
* added
*
* @param ea an EventAssignment_t structure to add
*
* @copydetails doc_returns_success_code
* @li @sbmlconstant{LIBSBML_OPERATION_SUCCESS, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_LEVEL_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_VERSION_MISMATCH, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_DUPLICATE_OBJECT_ID, OperationReturnValues_t}
* @li @sbmlconstant{LIBSBML_OPERATION_FAILED, OperationReturnValues_t}
*
* @memberof Event_t
*/
LIBSBML_EXTERN
int
Event_addEventAssignment (Event_t *e, const EventAssignment_t *ea);
/**
* Creates a new, empty EventAssignment_t structure, adds it to this
* Event_t's list of event assignments, and returns the EventAssignment_t.
*
* @param e the Event_t structure to which the event assignment should be
* added
*
* @memberof Event_t
*/
LIBSBML_EXTERN
EventAssignment_t *
Event_createEventAssignment (Event_t *e);
/**
* Creates a new, empty Trigger_t structure, adds it to this
* Event_t, and returns the Trigger_t.
*
* @param e the Event_t structure to which the trigger should be
* added
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Trigger_t *
Event_createTrigger (Event_t *e);
/**
* Creates a new, empty Delay_t structure, adds it to this
* Event_t, and returns the Delay_t.
*
* @param e the Event_t structure to which the delay should be
* added
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Delay_t *
Event_createDelay (Event_t *e);
/**
* Creates a new, empty Priority_t structure, adds it to this
* Event_t, and returns the Priority_t.
*
* @param e the Event_t structure to which the priority should be
* added
*
* @memberof Event_t
*/
LIBSBML_EXTERN
Priority_t *
Event_createPriority (Event_t *e);
/**
* Get the list of EventAssignment_t structures from the given Event_t
* structure.
*
* @param e the Event_t structure to use.
*
* @return the list of EventAssignments for the given Event_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
ListOf_t *
Event_getListOfEventAssignments (Event_t *e);
/**
* Return a specific EventAssignment_t structure of the given Event_t.
*
* @param e the Event_t structure to use
*
* @param n an integer, the index of the EventAssignment_t structure to return
*
* @return the nth EventAssignment_t of the given Event_t, or @c NULL if no such EventAssignment_t exists.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
EventAssignment_t *
Event_getEventAssignment (Event_t *e, unsigned int n);
/**
* Return the event assignment indicated by the given @p variable.
*
* @param e the Event_t structure to use
*
* @param variable a string, the identifier of the variable whose
* EventAssignment_t is being sought.
*
* @return the EventAssignment_t for the given variable, or @c NULL if no such
* EventAssignment_t exits.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
EventAssignment_t *
Event_getEventAssignmentByVar (Event_t *e, const char *variable);
/**
* Returns the number of EventAssignment_t structures attached to the given
* Event_t.
*
* @param e the Event_t structure to use
*
* @return the number of EventAssignment_t structures in the given Event_t.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
unsigned int
Event_getNumEventAssignments (const Event_t *e);
/**
* Removes the nth EventAssignment_t structure from the given Event_t structure and
* returns a pointer to it.
*
* The caller owns the returned structure and is responsible for deleting it.
*
* @param e the Event_t structure
* @param n the integer index of the EventAssignment_t sought
*
* @return the EventAssignment_t structure removed. As mentioned above,
* the caller owns the returned item. @c NULL is returned if the given index
* is out of range.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
EventAssignment_t *
Event_removeEventAssignment (Event_t *e, unsigned int n);
/**
* Removes the EventAssignment_t structure with the given "variable" attribute
* from the given Event_t structure and returns a pointer to it.
*
* The caller owns the returned structure and is responsible for deleting it.
*
* @param e the Event_t structure
* @param variable the string of the "variable" attribute of the EventAssignment_t sought
*
* @return the EventAssignment_t structure removed. As mentioned above, the
* caller owns the returned structure. @c NULL is returned if no EventAssignment_t
* structure with the "variable" attribute exists in the given Event_t structure.
*
* @memberof Event_t
*/
LIBSBML_EXTERN
EventAssignment_t *
Event_removeEventAssignmentByVar (Event_t *e, const char *variable);
/**
* Returns the Event_t structure having a given identifier.
*
* @param lo the ListOfEvents_t structure to search.
* @param sid the "id" attribute value being sought.
*
* @return item in the @p lo ListOfEvents with the given @p sid or a
* null pointer if no such item exists.
*
* @see ListOf_t
*
* @memberof ListOfEvents_t
*/
LIBSBML_EXTERN
Event_t *
ListOfEvents_getById (ListOf_t *lo, const char *sid);
/**
* Removes a Event_t structure based on its identifier.
*
* The caller owns the returned item and is responsible for deleting it.
*
* @param lo the list of Event_t structures to search.
* @param sid the "id" attribute value of the structure to remove
*
* @return The Event_t structure removed, or a null pointer if no such
* item exists in @p lo.
*
* @see ListOf_t
*
* @memberof ListOfEvents_t
*/
LIBSBML_EXTERN
Event_t *
ListOfEvents_removeById (ListOf_t *lo, const char *sid);
END_C_DECLS
LIBSBML_CPP_NAMESPACE_END
#endif /* !SWIG */
#endif /* Event_h */
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