/usr/include/OTB-5.8/otbMRFEnergy.h is in libotb-dev 5.8.0+dfsg-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 | /*=========================================================================
Program: ORFEO Toolbox
Language: C++
Date: $Date$
Version: $Revision$
Copyright (c) Centre National d'Etudes Spatiales. All rights reserved.
See OTBCopyright.txt for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notices for more information.
=========================================================================*/
#ifndef otbMRFEnergy_h
#define otbMRFEnergy_h
#include "itkConstNeighborhoodIterator.h"
#include "itkObject.h"
#include "itkArray.h"
namespace otb
{
/**
* \class MRFEnergy
* \brief This is the base class for energy function used in the MRF framework
*
* Derived class must reimplement the GetSingleValue() method.
*
* This class is meant to be used in the MRF framework with the otb::MarkovRandomFieldFilter
*
* \ingroup Markov
*
* \ingroup OTBMarkov
*/
template<class TInput1, class TInput2>
class ITK_EXPORT MRFEnergy : public itk::Object
{
public:
typedef MRFEnergy Self;
typedef itk::Object Superclass;
typedef itk::SmartPointer<Self> Pointer;
typedef itk::SmartPointer<const Self> ConstPointer;
typedef TInput1 InputImageType;
typedef TInput2 LabelledImageType;
typedef typename InputImageType::PixelType InputImagePixelType;
typedef typename LabelledImageType::PixelType LabelledImagePixelType;
typedef itk::ConstNeighborhoodIterator
<LabelledImageType> LabelledNeighborhoodIterator;
typedef itk::ConstNeighborhoodIterator
<InputImageType> InputNeighborhoodIterator;
typedef itk::Array<double> ParametersType;
itkNewMacro(Self);
itkTypeMacro(MRFEnergy, itk::Object);
itkSetMacro(NumberOfParameters, unsigned int);
itkGetConstMacro(NumberOfParameters, unsigned int);
// Get the parameters
const ParametersType& GetParameters(void) const
{
return this->m_Parameters;
}
void SetParameters(const ParametersType& parameters)
{
if (parameters.Size() != m_NumberOfParameters)
{
itkExceptionMacro(<< "Invalid number of parameters");
}
m_Parameters = parameters;
this->Modified();
}
virtual double GetSingleValue(const InputImagePixelType& itkNotUsed(value1), const LabelledImagePixelType& itkNotUsed(value2))
{
itkExceptionMacro(<< "GetSingleValue() has to be declared in child classes.");
}
virtual double GetValue(const InputImagePixelType& value1, const LabelledImagePixelType& value2)
{
return GetSingleValue(value1, value2);
}
virtual double GetValue(const LabelledNeighborhoodIterator& it, const LabelledImagePixelType& value2)
{
double result = 0.0;
unsigned int centerIndex = it.GetCenterNeighborhoodIndex();
InputImagePixelType value1; //TODO put also the other neighborhood ?
bool isInside = false;
unsigned int insideNeighbors = 0;
for (unsigned long pos = 0; pos < it.Size(); ++pos)
{
if (pos != centerIndex) //TODO put outside loop for faster access ?
{
value1 = it.GetPixel(pos, isInside);
if (isInside)
{
result += GetSingleValue(value1, value2);
++insideNeighbors;
}
}
}
return result / insideNeighbors;
}
virtual double GetValue(const InputNeighborhoodIterator& it, const LabelledImagePixelType& value2)
{
double result = 0.0;
unsigned int centerIndex = it.GetCenterNeighborhoodIndex();
InputImagePixelType value1; //TODO put also the other neighborhood ?
bool isInside = false;
unsigned int insideNeighbors = 0;
for (unsigned long pos = 0; pos < it.Size(); ++pos)
{
if (pos != centerIndex) //TODO put outside loop for faster access ?
{
value1 = it.GetPixel(pos, isInside);
if (isInside)
{
result += GetSingleValue(value1, value2);
++insideNeighbors;
}
}
}
return result / insideNeighbors;
}
protected:
// The constructor and destructor.
MRFEnergy() :
m_NumberOfParameters(1),
m_Parameters(0) {};
~MRFEnergy() ITK_OVERRIDE {}
unsigned int m_NumberOfParameters;
ParametersType m_Parameters;
};
template<class TInput2>
class ITK_EXPORT MRFEnergy<TInput2, TInput2> : public itk::Object
{
public:
typedef MRFEnergy Self;
typedef itk::Object Superclass;
typedef itk::SmartPointer<Self> Pointer;
typedef itk::SmartPointer<const Self> ConstPointer;
typedef TInput2 LabelledImageType;
typedef typename LabelledImageType::PixelType LabelledImagePixelType;
typedef itk::ConstNeighborhoodIterator
<LabelledImageType> LabelledNeighborhoodIterator;
typedef itk::Array<double> ParametersType;
itkNewMacro(Self);
itkTypeMacro(MRFEnergy, itk::Object);
itkSetMacro(NumberOfParameters, unsigned int);
itkGetConstMacro(NumberOfParameters, unsigned int);
// Get the parameters
const ParametersType& GetParameters(void) const
{
return this->m_Parameters;
}
void SetParameters(const ParametersType& parameters)
{
if (parameters.Size() != m_NumberOfParameters)
{
itkExceptionMacro(<< "Invalid number of parameters");
}
m_Parameters = parameters;
this->Modified();
}
virtual double GetSingleValue(const LabelledImagePixelType& itkNotUsed(value1), const LabelledImagePixelType& itkNotUsed(value2))
{
itkExceptionMacro(<< "GetSingleValue() has to be declared in child classes.");
}
virtual double GetValue(const LabelledImagePixelType& value1, const LabelledImagePixelType& value2)
{
return GetSingleValue(value1, value2);
}
virtual double GetValue(const LabelledNeighborhoodIterator& it, const LabelledImagePixelType& value2)
{
double result = 0.0;
unsigned int centerIndex = it.GetCenterNeighborhoodIndex();
LabelledImagePixelType value1; //TODO put also the other neighborhood ?
bool isInside = false;
unsigned int insideNeighbors = 0;
for (unsigned long pos = 0; pos < it.Size(); ++pos)
{
if (pos != centerIndex) //TODO put outside loop for faster access ?
{
value1 = it.GetPixel(pos, isInside);
if (isInside)
{
result += GetSingleValue(value1, value2);
++insideNeighbors;
}
}
}
return result / insideNeighbors;
}
protected:
// The constructor and destructor.
MRFEnergy() :
m_NumberOfParameters(1),
m_Parameters(0)
{};
~MRFEnergy() ITK_OVERRIDE {}
unsigned int m_NumberOfParameters;
ParametersType m_Parameters;
};
}
#endif
|