/usr/include/ngs/inl/PileupEvent.hpp is in libngs-sdk-dev 1.3.0-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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*
* PUBLIC DOMAIN NOTICE
* National Center for Biotechnology Information
*
* This software/database is a "United States Government Work" under the
* terms of the United States Copyright Act. It was written as part of
* the author's official duties as a United States Government employee and
* thus cannot be copyrighted. This software/database is freely available
* to the public for use. The National Library of Medicine and the U.S.
* Government have not placed any restriction on its use or reproduction.
*
* Although all reasonable efforts have been taken to ensure the accuracy
* and reliability of the software and data, the NLM and the U.S.
* Government do not and cannot warrant the performance or results that
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* Government disclaim all warranties, express or implied, including
* warranties of performance, merchantability or fitness for any particular
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* Please cite the author in any work or product based on this material.
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* ===========================================================================
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*/
#ifndef _inl_ngs_pileup_event_
#define _inl_ngs_pileup_event_
#ifndef _hpp_ngs_pileup_event_
#include <ngs/PileupEvent.hpp>
#endif
#ifndef _hpp_ngs_itf_pileup_eventitf_
#include <ngs/itf/PileupEventItf.hpp>
#endif
namespace ngs
{
/*----------------------------------------------------------------------
* PileupEvent
*/
inline
int PileupEvent :: getMappingQuality () const
throw ( ErrorMsg )
{ return self -> getMappingQuality (); }
inline
StringRef PileupEvent :: getAlignmentId () const
throw ( ErrorMsg )
{ return StringRef ( self -> getAlignmentId () ); }
inline
int64_t PileupEvent :: getAlignmentPosition () const
throw ( ErrorMsg )
{ return self -> getAlignmentPosition (); }
inline
int64_t PileupEvent :: getFirstAlignmentPosition () const
throw ( ErrorMsg )
{ return self -> getFirstAlignmentPosition (); }
inline
int64_t PileupEvent :: getLastAlignmentPosition () const
throw ( ErrorMsg )
{ return self -> getLastAlignmentPosition (); }
inline
PileupEvent :: PileupEventType PileupEvent :: getEventType () const
throw ( ErrorMsg )
{ return ( PileupEvent :: PileupEventType ) self -> getEventType (); }
inline
char PileupEvent :: getAlignmentBase () const
throw ( ErrorMsg )
{ return self -> getAlignmentBase (); }
inline
char PileupEvent :: getAlignmentQuality () const
throw ( ErrorMsg )
{ return self -> getAlignmentQuality (); }
inline
StringRef PileupEvent :: getInsertionBases () const
throw ( ErrorMsg )
{ return StringRef ( self -> getInsertionBases () ); }
inline
StringRef PileupEvent :: getInsertionQualities () const
throw ( ErrorMsg )
{ return StringRef ( self -> getInsertionQualities () ); }
inline
uint32_t PileupEvent :: getEventRepeatCount () const
throw ( ErrorMsg )
{ return self -> getEventRepeatCount (); }
inline
PileupEvent :: EventIndelType PileupEvent :: getEventIndelType () const
throw ( ErrorMsg )
{ return ( PileupEvent :: EventIndelType ) self -> getEventIndelType (); }
} // namespace ngs
#endif // _inl_ngs_pileup_event_
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