/usr/bin/transfer_annotation_to_groups is in roary 3.8.0+dfsg-1.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 | #!/usr/bin/env perl
package Bio::Roary::Main::TransferAnnotationToGroups;
$Bio::Roary::Main::TransferAnnotationToGroups::VERSION = '3.8.0';
# ABSTRACT: Take in a groups file and a set of GFF files and transfer the consensus annotation
# PODNAME: transfer_annotation_to_groups
use Cwd qw(abs_path);
BEGIN { unshift( @INC, abs_path('./lib') ) }
BEGIN { unshift( @INC, abs_path('./t/lib') ) }
use Bio::Roary::CommandLine::TransferAnnotationToGroups;
Bio::Roary::CommandLine::TransferAnnotationToGroups->new(args => \@ARGV, script_name => $0)->run;
__END__
=pod
=encoding UTF-8
=head1 NAME
transfer_annotation_to_groups - Take in a groups file and a set of GFF files and transfer the consensus annotation
=head1 VERSION
version 3.8.0
=head1 SYNOPSIS
Take in a groups file and a set of GFF files and transfer the consensus annotation
=head1 AUTHOR
Andrew J. Page <ap13@sanger.ac.uk>
=head1 COPYRIGHT AND LICENSE
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
=cut
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