/usr/lib/R/site-library/qvalue/INDEX is in r-bioc-qvalue 2.6.0-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 | empPvals Calculate p-values from a set of observed test
statistics and simulated null test statistics
hedenfalk P-values and test-statistics from the Hedenfalk
et al. (2001) gene expression dataset
hist.qvalue Histogram of p-values
lfdr Estimate local False Discovery Rate (FDR)
pi0est Proportion of true null p-values
plot.qvalue Plotting function for q-value object
qvalue Estimate the q-values for a given set of
p-values
summary.qvalue Display q-value object
write.qvalue Write results to file
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