r-bioc-cummerbund 2.16.0-2 in debian - stretch / main

About

This package is 2.0 MB. It is available at http://ftp.debian.org/debian/pool/main/r/r-bioc-cummerbund/r-bioc-cummerbund_2.16.0-2_all.deb .

View its full control file here: debian/control.

Description

tool for analysis of Cufflinks RNA-Seq output

Relations

This package does not recommend any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

r-bioc-cummerbund 2.16.0-2 is in debian - stretch / main. This package's architecture is: architectureless.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/lib/ root:root 0o755
/usr/lib/R/ root:root 0o755
/usr/lib/R/site-library/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/data/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/data/sampleData.rda application/gzip root:root 0o644 158 bytes
/usr/lib/R/site-library/cummeRbund/data/sampleData.RData application/gzip root:root 0o644 44.5 KB
/usr/lib/R/site-library/cummeRbund/DESCRIPTION text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/cummeRbund/doc/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/doc/cummeRbund-example-workflow.pdf application/pdf root:root 0o644 165.6 KB
/usr/lib/R/site-library/cummeRbund/doc/cummeRbund-example-workflow.R text/plain root:root 0o644 3.2 KB
/usr/lib/R/site-library/cummeRbund/doc/cummeRbund-example-workflow.Rnw text/x-tex root:root 0o644 4.9 KB
/usr/lib/R/site-library/cummeRbund/doc/cummeRbund-manual.pdf application/pdf root:root 0o644 1.3 MB
/usr/lib/R/site-library/cummeRbund/doc/cummeRbund-manual.R text/plain root:root 0o644 20.9 KB
/usr/lib/R/site-library/cummeRbund/doc/cummeRbund-manual.Rnw text/x-tex root:root 0o644 55.8 KB
/usr/lib/R/site-library/cummeRbund/doc/index.html text/html root:root 0o644 1.9 KB
/usr/lib/R/site-library/cummeRbund/extdata/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/extdata/cds.count_tracking text/plain root:root 0o644 77.7 KB
/usr/lib/R/site-library/cummeRbund/extdata/cds.diff text/plain root:root 0o644 92.0 KB
/usr/lib/R/site-library/cummeRbund/extdata/cds_exp.diff text/plain root:root 0o644 302.4 KB
/usr/lib/R/site-library/cummeRbund/extdata/cds.fpkm_tracking text/plain root:root 0o644 108.0 KB
/usr/lib/R/site-library/cummeRbund/extdata/cds.read_group_tracking text/plain root:root 0o644 235.3 KB
/usr/lib/R/site-library/cummeRbund/extdata/chr1_snippet.gtf text/plain root:root 0o644 2.5 MB
/usr/lib/R/site-library/cummeRbund/extdata/cuffData_schema.sql text/plain root:root 0o644 21.3 KB
/usr/lib/R/site-library/cummeRbund/extdata/gene_exp.diff text/plain root:root 0o644 141.6 KB
/usr/lib/R/site-library/cummeRbund/extdata/genes.count_tracking text/plain root:root 0o644 40.4 KB
/usr/lib/R/site-library/cummeRbund/extdata/genes.fpkm_tracking text/plain root:root 0o644 54.7 KB
/usr/lib/R/site-library/cummeRbund/extdata/genes.read_group_tracking text/plain root:root 0o644 118.1 KB
/usr/lib/R/site-library/cummeRbund/extdata/isoform_exp.diff text/plain root:root 0o644 429.1 KB
/usr/lib/R/site-library/cummeRbund/extdata/isoforms.count_tracking text/plain root:root 0o644 111.3 KB
/usr/lib/R/site-library/cummeRbund/extdata/isoforms.fpkm_tracking text/plain root:root 0o644 165.3 KB
/usr/lib/R/site-library/cummeRbund/extdata/isoforms.read_group_tracking text/plain root:root 0o644 374.9 KB
/usr/lib/R/site-library/cummeRbund/extdata/promoters.diff text/plain root:root 0o644 96.5 KB
/usr/lib/R/site-library/cummeRbund/extdata/read_groups.info text/plain root:root 0o644 402 bytes
/usr/lib/R/site-library/cummeRbund/extdata/run.info text/plain root:root 0o644 226 bytes
/usr/lib/R/site-library/cummeRbund/extdata/splicing.diff text/plain root:root 0o644 168.4 KB
/usr/lib/R/site-library/cummeRbund/extdata/tss_group_exp.diff text/plain root:root 0o644 225.4 KB
/usr/lib/R/site-library/cummeRbund/extdata/tss_groups.count_tracking text/plain root:root 0o644 60.6 KB
/usr/lib/R/site-library/cummeRbund/extdata/tss_groups.fpkm_tracking text/plain root:root 0o644 81.8 KB
/usr/lib/R/site-library/cummeRbund/extdata/tss_groups.read_group_tracking text/plain root:root 0o644 182.0 KB
/usr/lib/R/site-library/cummeRbund/help/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/help/aliases.rds application/gzip root:root 0o644 1.5 KB
/usr/lib/R/site-library/cummeRbund/help/AnIndex text/plain root:root 0o644 6.8 KB
/usr/lib/R/site-library/cummeRbund/help/cummeRbund.rdb application/octet-stream root:root 0o644 121.8 KB
/usr/lib/R/site-library/cummeRbund/help/cummeRbund.rdx application/gzip root:root 0o644 1.4 KB
/usr/lib/R/site-library/cummeRbund/help/paths.rds application/gzip root:root 0o644 583 bytes
/usr/lib/R/site-library/cummeRbund/html/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/html/00Index.html text/html root:root 0o644 22.2 KB
/usr/lib/R/site-library/cummeRbund/html/R.css text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/cummeRbund/INDEX text/plain root:root 0o644 2.8 KB
/usr/lib/R/site-library/cummeRbund/Meta/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/Meta/data.rds application/gzip root:root 0o644 119 bytes
/usr/lib/R/site-library/cummeRbund/Meta/hsearch.rds application/gzip root:root 0o644 2.5 KB
/usr/lib/R/site-library/cummeRbund/Meta/links.rds application/gzip root:root 0o644 1.7 KB
/usr/lib/R/site-library/cummeRbund/Meta/nsInfo.rds application/gzip root:root 0o644 751 bytes
/usr/lib/R/site-library/cummeRbund/Meta/package.rds application/gzip root:root 0o644 1.3 KB
/usr/lib/R/site-library/cummeRbund/Meta/Rd.rds application/gzip root:root 0o644 2.5 KB
/usr/lib/R/site-library/cummeRbund/Meta/vignette.rds application/gzip root:root 0o644 303 bytes
/usr/lib/R/site-library/cummeRbund/NAMESPACE text/x-objective-c root:root 0o644 1.4 KB
/usr/lib/R/site-library/cummeRbund/NEWS text/plain root:root 0o644 15.7 KB
/usr/lib/R/site-library/cummeRbund/R/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/R/cummeRbund text/plain root:root 0o644 1.0 KB
/usr/lib/R/site-library/cummeRbund/R/cummeRbund.rdb application/octet-stream root:root 0o644 553.4 KB
/usr/lib/R/site-library/cummeRbund/R/cummeRbund.rdx application/gzip root:root 0o644 6.0 KB
/usr/lib/R/site-library/cummeRbund/reports/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/reports/runReport.Rmd text/plain root:root 0o644 972 bytes
/usr/lib/R/site-library/cummeRbund/reports/styles/ root:root 0o755
/usr/lib/R/site-library/cummeRbund/reports/styles/report_style.css text/plain root:root 0o644 1.7 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/r-bioc-cummerbund/ root:root 0o755
/usr/share/doc/r-bioc-cummerbund/changelog.Debian.gz application/gzip root:root 0o644 1.1 KB
/usr/share/doc/r-bioc-cummerbund/copyright text/plain root:root 0o644 810 bytes
/usr/share/doc/r-bioc-cummerbund/examples/ root:root 0o755
/usr/share/doc/r-bioc-cummerbund/examples/vignettes/ root:root 0o755
/usr/share/doc/r-bioc-cummerbund/examples/vignettes/cuffData_schema.pdf.gz application/gzip root:root 0o644 125.1 KB
/usr/share/doc/r-bioc-cummerbund/examples/vignettes/cummeRbund-example-workflow.Rnw.gz application/gzip root:root 0o644 1.9 KB
/usr/share/doc/r-bioc-cummerbund/examples/vignettes/cummeRbund-manual.Rnw.gz application/gzip root:root 0o644 15.5 KB
/usr/share/doc/r-bioc-cummerbund/examples/vignettes/ENCODE_SCV.pdf.gz application/gzip root:root 0o644 27.1 KB
/usr/share/doc/r-bioc-cummerbund/README.test text/plain root:root 0o644 262 bytes
/usr/share/doc/r-bioc-cummerbund/run-unit-test text/x-shellscript root:root 0o644 479 bytes

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