/usr/lib/python2.7/dist-packages/pbcore/data/datasets/ccsaligned.dataset.xml is in python-pbcore 1.2.11+dfsg-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 | <?xml version="1.0" encoding="utf-8"?>
<pbds:ConsensusAlignmentSet
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://pacificbiosciences.com/PacBioDataModel.xsd"
xmlns:pbbase="http://pacificbiosciences.com/PacBioBaseDataModel.xsd"
xmlns:pbds="http://pacificbiosciences.com/PacBioDatasets.xsd"
UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe519c"
TimeStampedName="consensusreadset_150304_231155"
MetaType="PacBio.DataSet.ConsensusAlignmentSet"
Name="DataSet_ConsensusAlignmentSet"
Tags="barcode moreTags mapping mytags"
Version="2.3.0"
CreatedAt="2015-01-27T09:00:01">
<pbbase:ExternalResources>
<pbbase:ExternalResource
UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe5193"
TimeStampedName="consensusread_bam_150304_231155"
MetaType="PacBio.ConsensusReadFile.ConsensusReadBamFile"
Name="First ConsensusRead BAM"
Description="Points to an example ConsensusRead BAM file."
ResourceId="file:///mnt/path/to/ccsreads0.bam"
Tags="Example">
<pbbase:FileIndices>
<pbbase:FileIndex
UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe5293"
TimeStampedName="bam_index_150304_231155"
MetaType="PacBio.Index.PacBioIndex"
ResourceId="file:///mnt/path/to/ccsreads0.pbi"/>
</pbbase:FileIndices>
</pbbase:ExternalResource>
<pbbase:ExternalResource
UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe5393"
TimeStampedName="consensusread_bam_150304_231155"
MetaType="PacBio.ConsensusReadFile.ConsensusReadBamFile"
Name="Second ConsensusRead BAM"
Description="Points to an example ConsensusRead BAM file."
ResourceId="file:///mnt/path/to/ccsreads1.bam"
Tags="Example">
<pbbase:FileIndices>
<pbbase:FileIndex
UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe5493"
TimeStampedName="bam_index_150304_231155"
MetaType="PacBio.Index.PacBioIndex"
ResourceId="file:///mnt/path/to/ccsreads0.pbi"/>
</pbbase:FileIndices>
</pbbase:ExternalResource>
</pbbase:ExternalResources>
</pbds:ConsensusAlignmentSet>
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