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/usr/bin/jwt is in python-jwt 1.4.2-1+deb9u1.

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#!/usr/bin/python
# EASY-INSTALL-ENTRY-SCRIPT: 'PyJWT==1.4.2','console_scripts','jwt'
__requires__ = 'PyJWT==1.4.2'
import re
import sys
from pkg_resources import load_entry_point

if __name__ == '__main__':
    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
    sys.exit(
        load_entry_point('PyJWT==1.4.2', 'console_scripts', 'jwt')()
    )