/usr/share/perl5/GO/Handlers/summary.pm is in libgo-perl 0.15-5.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 | # $Id: summary.pm,v 1.3 2004/11/24 02:28:00 cmungall Exp $
#
# This GO module is maintained by Chris Mungall <cjm@fruitfly.org>
#
# see also - http://www.geneontology.org
# - http://www.godatabase.org/dev
#
# You may distribute this module under the same terms as perl itself
=head1 NAME
GO::Handlers::summary - summary about handlers
=head1 SYNOPSIS
=cut
=head1 DESCRIPTION
=head1 PUBLIC METHODS -
=cut
package GO::Handlers::summary;
use base qw(GO::Handlers::base);
sub init {
my $self = shift;
$self->{i} = 0;
$self->{counts} = {};
}
sub count {
my $self = shift;
my $type = shift;
if (!$self->{counts}->{$type}) {
$self->{counts}->{$type} = 0;
}
$self->{counts}->{$type}++;
}
sub start_event {
my $self = shift;
my $ev = shift;
return;
}
sub end_event {
my $self = shift;
my $ev = shift;
$self->count($ev);
if ($ev eq "assocs") {
print "TOTAL ASSOCS : $self->{counts}->{assoc}\n";
print "TOTAL PRODUCTS: $self->{counts}->{prod}\n";
print "TOTAL DBSETS : $self->{counts}->{dbset}\n";
}
if ($ev eq "obo") {
print "TOTAL TERMS : $self->{counts}->{term}\n";
print "TOTAL DEFS : $self->{counts}->{def}\n" if $self->{counts}->{def};
print "TOTAL SYNS : $self->{counts}->{synonym}\n";
print "TOTAL RELS : $self->{counts}->{relationship}\n" if $self->{counts}->{relationship};
print "TOTAL XREFS : $self->{counts}->{xref_analog}\n";
}
if ($ev eq "defs") {
print "TOTAL DEFS : $self->{counts}->{def}\n";
}
if ($ev eq "dbxrefs") {
print "TOTAL TERMXREFS : $self->{counts}->{termdbxref}\n";
}
#return $self->SUPER::end_event($ev);
return;
}
#sub e_term {
# my $self = shift;
# my $term = shift;
# my $ns = shift;
# return;
#}
sub event {
my $self = shift;
my $ev = shift;
my @args = @_;
my $arg = $args[0];
if (!ref($arg)) {
}
else {
$self->start_event($ev);
$self->evbody(@args);
$self->end_event($ev);
}
}
1;
|