r-bioc-genomicalignments 1.0.6-1 in debian - jessie / main

About

This package is 1.2 MB. It is available at http://ftp.debian.org/debian/pool/main/r/r-bioc-genomicalignments/r-bioc-genomicalignments_1.0.6-1_amd64.deb .

View its full control file here: debian/control.

Description

BioConductor representation and manipulation of short genomic alignments

Relations

This package depends on: r-base-core (>= 3.1.1-1), libc6 (>= 2.4), r-bioc-biocgenerics, r-bioc-iranges, r-bioc-genomicranges, r-bioc-biostrings, r-bioc-rsamtools (>= 1.15.26), r-bioc-bsgenome (>= 1.31.12), r-bioc-biocparallel.

This package recommends: r-bioc-shortread.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

r-bioc-genomicalignments 1.0.6-1 is in debian - jessie / main. This package's architecture is: amd64.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/lib/ root:root 0o755
/usr/lib/R/ root:root 0o755
/usr/lib/R/site-library/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/CITATION text/plain root:root 0o644 940 bytes
/usr/lib/R/site-library/GenomicAlignments/DESCRIPTION text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/GenomicAlignments/doc/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/doc/index.html text/html root:root 0o644 2.3 KB
/usr/lib/R/site-library/GenomicAlignments/doc/OverlapEncodings.pdf application/pdf root:root 0o644 247.9 KB
/usr/lib/R/site-library/GenomicAlignments/doc/OverlapEncodings.R text/plain root:root 0o644 31.3 KB
/usr/lib/R/site-library/GenomicAlignments/doc/OverlapEncodings.Rnw text/x-tex root:root 0o644 55.8 KB
/usr/lib/R/site-library/GenomicAlignments/doc/summarizeOverlaps.pdf application/pdf root:root 0o644 178.5 KB
/usr/lib/R/site-library/GenomicAlignments/doc/summarizeOverlaps.R text/plain root:root 0o644 7.8 KB
/usr/lib/R/site-library/GenomicAlignments/doc/summarizeOverlaps.Rnw text/x-tex root:root 0o644 12.8 KB
/usr/lib/R/site-library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.pdf application/pdf root:root 0o644 158.4 KB
/usr/lib/R/site-library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.R text/plain root:root 0o644 5.1 KB
/usr/lib/R/site-library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.Rnw text/x-tex root:root 0o644 14.1 KB
/usr/lib/R/site-library/GenomicAlignments/extdata/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/extdata/sm_treated1.bam application/gzip root:root 0o644 50.9 KB
/usr/lib/R/site-library/GenomicAlignments/extdata/sm_untreated1.bam application/gzip root:root 0o644 92.8 KB
/usr/lib/R/site-library/GenomicAlignments/help/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/help/aliases.rds application/gzip root:root 0o644 2.6 KB
/usr/lib/R/site-library/GenomicAlignments/help/AnIndex text/plain root:root 0o644 17.6 KB
/usr/lib/R/site-library/GenomicAlignments/help/GenomicAlignments.rdb application/octet-stream root:root 0o644 205.7 KB
/usr/lib/R/site-library/GenomicAlignments/help/GenomicAlignments.rdx application/gzip root:root 0o644 700 bytes
/usr/lib/R/site-library/GenomicAlignments/help/paths.rds application/gzip root:root 0o644 360 bytes
/usr/lib/R/site-library/GenomicAlignments/html/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/html/00Index.html text/html root:root 0o644 35.0 KB
/usr/lib/R/site-library/GenomicAlignments/html/R.css text/plain root:root 0o644 1.2 KB
/usr/lib/R/site-library/GenomicAlignments/INDEX text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/GenomicAlignments/libs/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/libs/GenomicAlignments.so application/x-sharedlib root:root 0o644 50.4 KB
/usr/lib/R/site-library/GenomicAlignments/Meta/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/Meta/hsearch.rds application/gzip root:root 0o644 3.2 KB
/usr/lib/R/site-library/GenomicAlignments/Meta/links.rds application/gzip root:root 0o644 2.6 KB
/usr/lib/R/site-library/GenomicAlignments/Meta/nsInfo.rds application/gzip root:root 0o644 1.2 KB
/usr/lib/R/site-library/GenomicAlignments/Meta/package.rds application/gzip root:root 0o644 1.5 KB
/usr/lib/R/site-library/GenomicAlignments/Meta/Rd.rds application/gzip root:root 0o644 3.1 KB
/usr/lib/R/site-library/GenomicAlignments/Meta/vignette.rds application/gzip root:root 0o644 463 bytes
/usr/lib/R/site-library/GenomicAlignments/NAMESPACE text/plain root:root 0o644 4.8 KB
/usr/lib/R/site-library/GenomicAlignments/NEWS.Rd text/x-tex root:root 0o644 332 bytes
/usr/lib/R/site-library/GenomicAlignments/R/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/R/GenomicAlignments text/plain root:root 0o644 1.0 KB
/usr/lib/R/site-library/GenomicAlignments/R/GenomicAlignments.rdb application/octet-stream root:root 0o644 454.7 KB
/usr/lib/R/site-library/GenomicAlignments/R/GenomicAlignments.rdx application/gzip root:root 0o644 7.5 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/ root:root 0o755
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_cigar-utils.R text/plain root:root 0o644 4.6 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_findSpliceOverlaps-methods.R text/plain root:root 0o644 9.7 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_GAlignments-class.R text/plain root:root 0o644 1.1 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_GAlignmentsList-class.R text/plain root:root 0o644 4.3 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_intra-range-methods.R text/plain root:root 0o644 1.6 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_readGAlignmentPairsFromBam.R text/plain root:root 0o644 12.0 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_readGAlignmentsFromBam.R text/plain root:root 0o644 2.4 KB
/usr/lib/R/site-library/GenomicAlignments/unitTests/test_summarizeOverlaps-methods.R text/plain root:root 0o644 12.2 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/r-bioc-genomicalignments/ root:root 0o755
/usr/share/doc/r-bioc-genomicalignments/changelog.Debian.gz application/gzip root:root 0o644 213 bytes
/usr/share/doc/r-bioc-genomicalignments/copyright text/plain root:root 0o644 5.2 KB
/usr/share/doc/r-bioc-genomicalignments/README.test text/plain root:root 0o644 822 bytes

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