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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 | Package: biovizBase
Version: 1.12.3
Title: Basic graphic utilities for visualization of genomic data.
Description: The biovizBase package is designed to provide a set of
utilities, color schemes and conventions for genomic data. It
serves as the base for various high-level packages for
biological data visualization. This saves development effort
and encourages consistency.
Author: Tengfei Yin, Michael Lawrence, Dianne Cook
Maintainer: Tengfei Yin <yintengfei@gmail.com>
Depends: R (>= 2.10), methods
Imports: methods, grDevices, stats, scales, Hmisc, RColorBrewer,
dichromat, BiocGenerics, IRanges, GenomicRanges (>= 1.13.3),
Biostrings, Rsamtools (>= 1.13.1), GenomicAlignments,
GenomicFeatures, AnnotationDbi, VariantAnnotation
Suggests: BSgenome.Hsapiens.UCSC.hg19,
TxDb.Hsapiens.UCSC.hg19.knownGene, BSgenome, rtracklayer
License: Artistic-2.0
LazyLoad: Yes
Collate: utils.R color.R AllGenerics.R crunch-method.R mold-method.R
addStepping-method.R getFragLength-method.R
shrinkageFun-method.R maxGap-method.R spliceSummary-method.R
ideogram.R pileup.R coverage.R labs.R original.R transform.R
facets-method.R aes.R scale.R zzz.R biovizBase-package.R
biocViews: Infrastructure, Visualization, Preprocessing
Packaged: 2014-08-27 02:47:22 UTC; biocbuild
Built: R 3.1.1; x86_64-pc-linux-gnu; 2014-09-17 09:45:51 UTC; unix
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