This file is indexed.

/usr/lib/python2.7/dist-packages/matplotlib/tests/test_cbook.py is in python-matplotlib 1.4.2-3.1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
from __future__ import (absolute_import, division, print_function,
                        unicode_literals)

import six

from datetime import datetime

import numpy as np
from numpy.testing.utils import (assert_array_equal, assert_approx_equal,
                                 assert_array_almost_equal)
from nose.tools import assert_equal, raises, assert_true

import matplotlib.cbook as cbook
import matplotlib.colors as mcolors
from matplotlib.cbook import delete_masked_points as dmp


def test_is_string_like():
    y = np.arange(10)
    assert_equal(cbook.is_string_like(y), False)
    y.shape = 10, 1
    assert_equal(cbook.is_string_like(y), False)
    y.shape = 1, 10
    assert_equal(cbook.is_string_like(y), False)

    assert cbook.is_string_like("hello world")
    assert_equal(cbook.is_string_like(10), False)


def test_restrict_dict():
    d = {'foo': 'bar', 1: 2}
    d1 = cbook.restrict_dict(d, ['foo', 1])
    assert_equal(d1, d)
    d2 = cbook.restrict_dict(d, ['bar', 2])
    assert_equal(d2, {})
    d3 = cbook.restrict_dict(d, {'foo': 1})
    assert_equal(d3, {'foo': 'bar'})
    d4 = cbook.restrict_dict(d, {})
    assert_equal(d4, {})
    d5 = cbook.restrict_dict(d, set(['foo', 2]))
    assert_equal(d5, {'foo': 'bar'})
    # check that d was not modified
    assert_equal(d, {'foo': 'bar', 1: 2})


class Test_delete_masked_points:
    def setUp(self):
        self.mask1 = [False, False, True, True, False, False]
        self.arr0 = np.arange(1.0, 7.0)
        self.arr1 = [1, 2, 3, np.nan, np.nan, 6]
        self.arr2 = np.array(self.arr1)
        self.arr3 = np.ma.array(self.arr2, mask=self.mask1)
        self.arr_s = ['a', 'b', 'c', 'd', 'e', 'f']
        self.arr_s2 = np.array(self.arr_s)
        self.arr_dt = [datetime(2008, 1, 1), datetime(2008, 1, 2),
                       datetime(2008, 1, 3), datetime(2008, 1, 4),
                       datetime(2008, 1, 5), datetime(2008, 1, 6)]
        self.arr_dt2 = np.array(self.arr_dt)
        self.arr_colors = ['r', 'g', 'b', 'c', 'm', 'y']
        self.arr_rgba = mcolors.colorConverter.to_rgba_array(self.arr_colors)

    @raises(ValueError)
    def test_bad_first_arg(self):
        dmp('a string', self.arr0)

    def test_string_seq(self):
        actual = dmp(self.arr_s, self.arr1)
        ind = [0, 1, 2, 5]
        expected = (self.arr_s2.take(ind), self.arr2.take(ind))
        assert_array_equal(actual[0], expected[0])
        assert_array_equal(actual[1], expected[1])

    def test_datetime(self):
        actual = dmp(self.arr_dt, self.arr3)
        ind = [0, 1,  5]
        expected = (self.arr_dt2.take(ind),
                    self.arr3.take(ind).compressed())
        assert_array_equal(actual[0], expected[0])
        assert_array_equal(actual[1], expected[1])

    def test_rgba(self):
        actual = dmp(self.arr3, self.arr_rgba)
        ind = [0, 1, 5]
        expected = (self.arr3.take(ind).compressed(),
                    self.arr_rgba.take(ind, axis=0))
        assert_array_equal(actual[0], expected[0])
        assert_array_equal(actual[1], expected[1])


def test_allequal():
    assert(cbook.allequal([1, 1, 1]))
    assert(not cbook.allequal([1, 1, 0]))
    assert(cbook.allequal([]))
    assert(cbook.allequal(('a', 'a')))
    assert(not cbook.allequal(('a', 'b')))


class Test_boxplot_stats:
    def setup(self):
        np.random.seed(937)
        self.nrows = 37
        self.ncols = 4
        self.data = np.random.lognormal(size=(self.nrows, self.ncols),
                                        mean=1.5, sigma=1.75)
        self.known_keys = sorted([
            'mean', 'med', 'q1', 'q3', 'iqr',
            'cilo', 'cihi', 'whislo', 'whishi',
            'fliers', 'label'
        ])
        self.std_results = cbook.boxplot_stats(self.data)

        self.known_nonbootstrapped_res = {
            'cihi': 6.8161283264444847,
            'cilo': -0.1489815330368689,
            'iqr': 13.492709959447094,
            'mean': 13.00447442387868,
            'med': 3.3335733967038079,
            'fliers': np.array([
                92.55467075,  87.03819018,  42.23204914,  39.29390996
            ]),
            'q1': 1.3597529879465153,
            'q3': 14.85246294739361,
            'whishi': 27.899688243699629,
            'whislo': 0.042143774965502923
        }

        self.known_bootstrapped_ci = {
            'cihi': 8.939577523357828,
            'cilo': 1.8692703958676578,
        }

        self.known_whis3_res = {
            'whishi': 42.232049135969874,
            'whislo': 0.042143774965502923,
            'fliers': np.array([92.55467075, 87.03819018]),
        }

        self.known_res_percentiles = {
            'whislo':   0.1933685896907924,
            'whishi':  42.232049135969874
        }

        self.known_res_range = {
            'whislo': 0.042143774965502923,
            'whishi': 92.554670752188699

        }

    def test_form_main_list(self):
        assert_true(isinstance(self.std_results, list))

    def test_form_each_dict(self):
        for res in self.std_results:
            assert_true(isinstance(res, dict))

    def test_form_dict_keys(self):
        for res in self.std_results:
            keys = sorted(list(res.keys()))
            for key in keys:
                assert_true(key in self.known_keys)

    def test_results_baseline(self):
        res = self.std_results[0]
        for key in list(self.known_nonbootstrapped_res.keys()):
            if key != 'fliers':
                assert_statement = assert_approx_equal
            else:
                assert_statement = assert_array_almost_equal

            assert_statement(
                res[key],
                self.known_nonbootstrapped_res[key]
            )

    def test_results_bootstrapped(self):
        results = cbook.boxplot_stats(self.data, bootstrap=10000)
        res = results[0]
        for key in list(self.known_bootstrapped_ci.keys()):
            assert_approx_equal(
                res[key],
                self.known_bootstrapped_ci[key]
            )

    def test_results_whiskers_float(self):
        results = cbook.boxplot_stats(self.data, whis=3)
        res = results[0]
        for key in list(self.known_whis3_res.keys()):
            if key != 'fliers':
                assert_statement = assert_approx_equal
            else:
                assert_statement = assert_array_almost_equal

            assert_statement(
                res[key],
                self.known_whis3_res[key]
            )

    def test_results_whiskers_range(self):
        results = cbook.boxplot_stats(self.data, whis='range')
        res = results[0]
        for key in list(self.known_res_range.keys()):
            if key != 'fliers':
                assert_statement = assert_approx_equal
            else:
                assert_statement = assert_array_almost_equal

            assert_statement(
                res[key],
                self.known_res_range[key]
            )

    def test_results_whiskers_percentiles(self):
        results = cbook.boxplot_stats(self.data, whis=[5, 95])
        res = results[0]
        for key in list(self.known_res_percentiles.keys()):
            if key != 'fliers':
                assert_statement = assert_approx_equal
            else:
                assert_statement = assert_array_almost_equal

            assert_statement(
                res[key],
                self.known_res_percentiles[key]
            )

    def test_results_withlabels(self):
        labels = ['Test1', 2, 'ardvark', 4]
        results = cbook.boxplot_stats(self.data, labels=labels)
        res = results[0]
        for lab, res in zip(labels, results):
            assert_equal(res['label'], lab)

        results = cbook.boxplot_stats(self.data)
        for res in results:
            assert('label' not in res)

    @raises(ValueError)
    def test_label_error(self):
        labels = [1, 2]
        results = cbook.boxplot_stats(self.data, labels=labels)

    @raises(ValueError)
    def test_bad_dims(self):
        data = np.random.normal(size=(34, 34, 34))
        results = cbook.boxplot_stats(data)