This file is indexed.

/usr/share/pymol/data/demo/pept.pdb is in pymol 1.7.2.1-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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ATOM      1  N   ASP E   1       4.868 -17.809  25.188  1.00 34.37      E    N
ATOM      2  CA  ASP E   1       3.984 -16.723  25.698  1.00 33.85      E    C
ATOM      3  CB  ASP E   1       4.633 -16.020  26.888  1.00 35.91      E    C
ATOM      4  CG  ASP E   1       6.016 -15.468  26.567  1.00 39.23      E    C
ATOM      5  OD1 ASP E   1       6.340 -14.367  27.058  1.00 42.40      E    O
ATOM      6  OD2 ASP E   1       6.787 -16.131  25.836  1.00 39.28      E    O
ATOM      7  C   ASP E   1       3.789 -15.753  24.546  1.00 33.96      E    C
ATOM      8  O   ASP E   1       4.456 -15.889  23.517  1.00 35.44      E    O
ATOM      9  N   CYS E   2       2.908 -14.771  24.711  1.00 31.94      E    N
ATOM     10  CA  CYS E   2       2.638 -13.825  23.633  1.00 29.67      E    C
ATOM     11  CB  CYS E   2       1.198 -13.996  23.132  1.00 28.73      E    C
ATOM     12  SG  CYS E   2       0.725 -15.681  22.638  1.00 25.85      E    S
ATOM     13  C   CYS E   2       2.842 -12.366  24.012  1.00 30.31      E    C
ATOM     14  O   CYS E   2       3.025 -12.039  25.188  1.00 30.74      E    O
ATOM     15  N   ALA E   3       2.792 -11.504  22.996  1.00 30.15      E    N
ATOM     16  CA  ALA E   3       2.923 -10.056  23.151  1.00 30.15      E    C
ATOM     17  CB  ALA E   3       4.226  -9.566  22.552  1.00 30.82      E    C
ATOM     18  C   ALA E   3       1.736  -9.418  22.436  1.00 29.90      E    C
ATOM     19  O   ALA E   3       1.332  -9.867  21.362  1.00 28.16      E    O
ATOM     20  N   TRP E   4       1.173  -8.377  23.038  1.00 31.77      E    N
ATOM     21  CA  TRP E   4       0.007  -7.715  22.471  1.00 32.08      E    C
ATOM     22  CB  TRP E   4      -1.233  -7.992  23.344  1.00 32.83      E    C
ATOM     23  CG  TRP E   4      -1.500  -9.458  23.636  1.00 35.04      E    C
ATOM     24  CD1 TRP E   4      -0.831 -10.264  24.528  1.00 35.36      E    C
ATOM     25  CD2 TRP E   4      -2.507 -10.285  23.037  1.00 35.86      E    C
ATOM     26  CE2 TRP E   4      -2.390 -11.576  23.610  1.00 34.80      E    C
ATOM     27  CE3 TRP E   4      -3.500 -10.059  22.069  1.00 36.66      E    C
ATOM     28  NE1 TRP E   4      -1.360 -11.535  24.514  1.00 33.13      E    N
ATOM     29  CZ2 TRP E   4      -3.228 -12.638  23.249  1.00 36.81      E    C
ATOM     30  CZ3 TRP E   4      -4.338 -11.120  21.706  1.00 37.35      E    C
ATOM     31  CH2 TRP E   4      -4.194 -12.390  22.297  1.00 38.27      E    C
ATOM     32  C   TRP E   4       0.231  -6.212  22.372  1.00 32.17      E    C
ATOM     33  O   TRP E   4       0.752  -5.592  23.297  1.00 33.32      E    O
ATOM     34  N   HIS E   5      -0.135  -5.634  21.235  1.00 32.18      E    N
ATOM     35  CA  HIS E   5      -0.006  -4.205  21.043  1.00 32.91      E    C
ATOM     36  CB  HIS E   5       0.791  -3.871  19.783  1.00 33.02      E    C
ATOM     37  CG  HIS E   5       0.939  -2.396  19.549  1.00 32.86      E    C
ATOM     38  CD2 HIS E   5       0.582  -1.619  18.499  1.00 31.48      E    C
ATOM     39  ND1 HIS E   5       1.470  -1.542  20.495  1.00 29.87      E    N
ATOM     40  CE1 HIS E   5       1.431  -0.303  20.038  1.00 29.68      E    C
ATOM     41  NE2 HIS E   5       0.896  -0.322  18.831  1.00 29.87      E    N
ATOM     42  C   HIS E   5      -1.408  -3.636  20.918  1.00 34.58      E    C
ATOM     43  O   HIS E   5      -2.092  -3.870  19.914  1.00 35.87      E    O
ATOM     44  N   LEU E   6      -1.838  -2.904  21.943  1.00 34.54      E    N
ATOM     45  CA  LEU E   6      -3.165  -2.295  21.956  1.00 34.66      E    C
ATOM     46  CB  LEU E   6      -3.266  -1.199  20.892  1.00 34.44      E    C
ATOM     47  CG  LEU E   6      -2.302  -0.023  21.018  1.00 35.32      E    C
ATOM     48  CD1 LEU E   6      -2.422   0.863  19.781  1.00 34.55      E    C
ATOM     49  CD2 LEU E   6      -2.582   0.753  22.302  1.00 33.68      E    C
ATOM     50  C   LEU E   6      -4.242  -3.339  21.698  1.00 36.23      E    C
ATOM     51  O   LEU E   6      -5.181  -3.100  20.933  1.00 35.26      E    O
ATOM     52  N   GLY E   7      -4.087  -4.506  22.315  1.00 37.53      E    N
ATOM     53  CA  GLY E   7      -5.063  -5.564  22.138  1.00 38.95      E    C
ATOM     54  C   GLY E   7      -4.781  -6.514  20.988  1.00 39.52      E    C
ATOM     55  O   GLY E   7      -5.188  -7.669  21.049  1.00 42.08      E    O
ATOM     56  N   GLU E   8      -4.092  -6.046  19.948  1.00 39.31      E    N
ATOM     57  CA  GLU E   8      -3.771  -6.883  18.787  1.00 38.11      E    C
ATOM     58  CB  GLU E   8      -3.361  -6.012  17.607  1.00 40.57      E    C
ATOM     59  CG  GLU E   8      -4.472  -5.586  16.679  1.00 43.48      E    C
ATOM     60  CD  GLU E   8      -3.920  -4.806  15.506  1.00 47.43      E    C
ATOM     61  OE1 GLU E   8      -3.572  -5.421  14.467  1.00 44.53      E    O
ATOM     62  OE2 GLU E   8      -3.800  -3.572  15.644  1.00 50.21      E    O
ATOM     63  C   GLU E   8      -2.646  -7.877  19.066  1.00 35.96      E    C
ATOM     64  O   GLU E   8      -1.643  -7.529  19.691  1.00 37.36      E    O
ATOM     65  N   LEU E   9      -2.793  -9.104  18.579  1.00 32.21      E    N
ATOM     66  CA  LEU E   9      -1.763 -10.108  18.791  1.00 27.94      E    C
ATOM     67  CB  LEU E   9      -2.275 -11.515  18.478  1.00 28.00      E    C
ATOM     68  CG  LEU E   9      -1.255 -12.643  18.693  1.00 27.79      E    C
ATOM     69  CD1 LEU E   9      -0.819 -12.720  20.160  1.00 24.02      E    C
ATOM     70  CD2 LEU E   9      -1.848 -13.963  18.233  1.00 26.33      E    C
ATOM     71  C   LEU E   9      -0.569  -9.800  17.911  1.00 25.48      E    C
ATOM     72  O   LEU E   9      -0.699  -9.660  16.692  1.00 25.09      E    O
ATOM     73  N   VAL E  10       0.589  -9.697  18.547  1.00 22.25      E    N
ATOM     74  CA  VAL E  10       1.835  -9.417  17.858  1.00 18.77      E    C
ATOM     75  CB  VAL E  10       2.797  -8.578  18.759  1.00 17.44      E    C
ATOM     76  CG1 VAL E  10       4.131  -8.351  18.068  1.00 17.34      E    C
ATOM     77  CG2 VAL E  10       2.166  -7.248  19.110  1.00 17.12      E    C
ATOM     78  C   VAL E  10       2.537 -10.717  17.473  1.00 19.09      E    C
ATOM     79  O   VAL E  10       2.708 -11.019  16.296  1.00 18.92      E    O
ATOM     80  N   TRP E  11       2.886 -11.525  18.465  1.00 19.41      E    N
ATOM     81  CA  TRP E  11       3.622 -12.742  18.191  1.00 18.86      E    C
ATOM     82  CB  TRP E  11       5.059 -12.338  17.887  1.00 14.44      E    C
ATOM     83  CG  TRP E  11       5.840 -13.342  17.171  1.00 14.67      E    C
ATOM     84  CD1 TRP E  11       6.700 -14.257  17.709  1.00 11.97      E    C
ATOM     85  CD2 TRP E  11       5.886 -13.519  15.756  1.00 16.13      E    C
ATOM     86  CE2 TRP E  11       6.804 -14.562  15.500  1.00 17.59      E    C
ATOM     87  CE3 TRP E  11       5.250 -12.894  14.676  1.00 18.07      E    C
ATOM     88  NE1 TRP E  11       7.284 -14.992  16.711  1.00 13.12      E    N
ATOM     89  CZ2 TRP E  11       7.101 -14.995  14.196  1.00 16.12      E    C
ATOM     90  CZ3 TRP E  11       5.548 -13.321  13.382  1.00 16.68      E    C
ATOM     91  CH2 TRP E  11       6.466 -14.362  13.157  1.00 17.19      E    C
ATOM     92  C   TRP E  11       3.637 -13.609  19.431  1.00 21.88      E    C
ATOM     93  O   TRP E  11       3.449 -13.097  20.534  1.00 24.04      E    O
ATOM     94  N   CYS E  12       3.878 -14.908  19.252  1.00 24.56      E    N
ATOM     95  CA  CYS E  12       3.978 -15.845  20.367  1.00 27.16      E    C
ATOM     96  CB  CYS E  12       2.709 -16.674  20.541  1.00 25.57      E    C
ATOM     97  SG  CYS E  12       1.146 -15.762  20.653  1.00 29.62      E    S
ATOM     98  C   CYS E  12       5.126 -16.810  20.107  1.00 30.17      E    C
ATOM     99  O   CYS E  12       5.278 -17.322  18.998  1.00 29.17      E    O
ATOM    100  N   THR E  13       5.959 -17.026  21.117  1.00 35.02      E    N
ATOM    101  CA  THR E  13       7.053 -17.973  20.984  1.00 39.40      E    C
ATOM    102  CB  THR E  13       8.289 -17.578  21.828  1.00 38.42      E    C
ATOM    103  CG2 THR E  13       8.919 -16.310  21.286  1.00 37.78      E    C
ATOM    104  OG1 THR E  13       7.908 -17.397  23.194  1.00 38.69      E    O
ATOM    105  C   THR E  13       6.513 -19.322  21.459  1.00 42.05      E    C
ATOM    106  O   THR E  13       5.962 -19.432  22.570  1.00 41.54      E    O
ATOM    107  OXT THR E  13       6.606 -20.331  20.602  1.00 43.02      E    O
END