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/usr/include/sofa/component/mapping/TubularMapping.inl is in libsofa1-dev 1.0~beta4-9.

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/******************************************************************************
*       SOFA, Simulation Open-Framework Architecture, version 1.0 beta 4      *
*                (c) 2006-2009 MGH, INRIA, USTL, UJF, CNRS                    *
*                                                                             *
* This library is free software; you can redistribute it and/or modify it     *
* under the terms of the GNU Lesser General Public License as published by    *
* the Free Software Foundation; either version 2.1 of the License, or (at     *
* your option) any later version.                                             *
*                                                                             *
* This library is distributed in the hope that it will be useful, but WITHOUT *
* ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or       *
* FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License *
* for more details.                                                           *
*                                                                             *
* You should have received a copy of the GNU Lesser General Public License    *
* along with this library; if not, write to the Free Software Foundation,     *
* Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301 USA.          *
*******************************************************************************
*                               SOFA :: Modules                               *
*                                                                             *
* Authors: The SOFA Team and external contributors (see Authors.txt)          *
*                                                                             *
* Contact information: contact@sofa-framework.org                             *
******************************************************************************/
#ifndef SOFA_COMPONENT_MAPPING_TUBULARMAPPING_INL
#define SOFA_COMPONENT_MAPPING_TUBULARMAPPING_INL

#include <sofa/component/mapping/TubularMapping.h>
#include <sofa/defaulttype/VecTypes.h>
#include <sofa/defaulttype/RigidTypes.h>
#include <sofa/core/componentmodel/behavior/MechanicalMapping.inl>
#include <sofa/core/componentmodel/behavior/MechanicalState.h>


namespace sofa
{

namespace component
{

namespace mapping
{

template <class BasicMapping>
void TubularMapping<BasicMapping>::init()
{	
	this->BasicMapping::init();
	
}



template <class BasicMapping>
void TubularMapping<BasicMapping>::apply ( typename Out::VecCoord& out, const typename In::VecCoord& in )
{
	// Propagation of positions from the input DOFs to the output DOFs

	//sout << "TubularMapping<BasicMapping>::apply"<<sendl;

	if(out.size() != rotatedPoints.size()){
		rotatedPoints.resize(out.size());
	}

	unsigned int N = m_nbPointsOnEachCircle.getValue();
	double rho = m_radius.getValue();
 	
	out.resize(in.size() * N);
	rotatedPoints.resize(in.size() * N);

	Vec Y0;
	Vec Z0;
	Y0[0] = (Real) (0.0); Y0[1] = (Real) (1.0); Y0[2] = (Real) (0.0);
	Z0[0] = (Real) (0.0); Z0[1] = (Real) (0.0); Z0[2] = (Real) (1.0);

	for (unsigned int i=0; i<in.size(); i++)
	{		
		Vec curPos = in[i].getCenter();
		
		Mat rotation;
		in[i].writeRotationMatrix(rotation);

		Vec Y; 
		Vec Z;

		Y = rotation * Y0;
		Z = rotation * Z0;		

		for(unsigned int j=0; j<N; ++j){

			rotatedPoints[i*N+j] = (Y*cos((Real) (2.0*j*M_PI/N)) + Z*sin((Real) (2.0*j*M_PI/N)))*((Real) rho);
			Vec x = curPos + rotatedPoints[i*N+j];
			//sout << "INFO_print : TubularMapping  DO move point - j = " << j << " , curPos = " << curPos <<  " , x = " << x << sendl;

			out[i*N+j] = x;			
		}	
	}
}



template <class BasicMapping>
void TubularMapping<BasicMapping>::applyJ( typename Out::VecDeriv& out, const typename In::VecDeriv& in )
{
	
	// Propagation of velocities from the input DOFs to the output DOFs

	if(out.size() != rotatedPoints.size()){
		rotatedPoints.resize(out.size());
	}

	unsigned int N = m_nbPointsOnEachCircle.getValue();
 	
	out.resize(in.size() * N);
	Deriv v,omega;

	for (unsigned int i=0; i<in.size(); i++)
	{
		v = in[i].getVCenter();
		omega = in[i].getVOrientation();		

		for(unsigned int j=0; j<N; ++j){

			out[i*N+j] = v - cross(rotatedPoints[i*N+j],omega);		
			//sout << "INFO_print : TubularMapping  DO moveJ point - j = " << j << " , curPos = " << v <<  " , x = " << out[i*N+j] << sendl;
		}	
	}
}


template <class BasicMapping>
void TubularMapping<BasicMapping>::applyJT( typename In::VecDeriv& out, const typename Out::VecDeriv& in )
{	
	// usefull for a Mechanical Mapping that propagates forces from the output DOFs to the input DOFs

	//sout << "INFO_print : pass HERE applyJT !!!" << sendl;
	
	if(in.size() != rotatedPoints.size()){
		rotatedPoints.resize(in.size());
	}
	
	unsigned int N = m_nbPointsOnEachCircle.getValue();

	Deriv v,omega;	

	for (unsigned int i=0; i<out.size(); i++)
	{
		for(unsigned int j=0; j<N; j++){

			Deriv f = in[i*N+j];
			v += f;
			omega += cross(rotatedPoints[i*N+j],f);
		}

			out[i].getVCenter() += v;	
			out[i].getVOrientation() += omega;	
			//sout << "INFO_print : TubularMapping  DO moveJT point - i = " << i << sendl;			
	}
	
}

/*
template <class BasicMapping>
void TubularMapping<BasicMapping>::applyJT( typename In::VecConst& out, const typename Out::VecConst& in )
{	
	sout << "INFO_print : pass HERE applyJT CONST !!!" << sendl;

	Deriv v0;
	v0[0] = (Real) (0.0); v0[1] = (Real) (0.0); v0[2] = (Real) (0.0);

	for (unsigned int i=0; i<out.size(); i++)
	{
			out[i].getVCenter() = v0;	
			out[i].getVOrientation() = v0;	
			sout << "INFO_print : TubularMapping  DO moveJT point - i = " << i << sendl;			
	}
}
*/

} // namespace mapping

} // namespace component

} // namespace sofa

#endif // SOFA_COMPONENT_MAPPING_TUBULARMAPPING_INL