/usr/include/sofa/component/mapping/ArticulatedSystemMapping.inl is in libsofa1-dev 1.0~beta4-9.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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* SOFA, Simulation Open-Framework Architecture, version 1.0 beta 4 *
* (c) 2006-2009 MGH, INRIA, USTL, UJF, CNRS *
* *
* This library is free software; you can redistribute it and/or modify it *
* under the terms of the GNU Lesser General Public License as published by *
* the Free Software Foundation; either version 2.1 of the License, or (at *
* your option) any later version. *
* *
* This library is distributed in the hope that it will be useful, but WITHOUT *
* ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or *
* FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License *
* for more details. *
* *
* You should have received a copy of the GNU Lesser General Public License *
* along with this library; if not, write to the Free Software Foundation, *
* Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. *
*******************************************************************************
* SOFA :: Modules *
* *
* Authors: The SOFA Team and external contributors (see Authors.txt) *
* *
* Contact information: contact@sofa-framework.org *
******************************************************************************/
#ifndef SOFA_COMPONENT_MAPPING_ARTICULATEDSYSTEMMAPPING_INL
#define SOFA_COMPONENT_MAPPING_ARTICULATEDSYSTEMMAPPING_INL
#include <sofa/component/mapping/ArticulatedSystemMapping.h>
#include <sofa/simulation/common/Simulation.h>
#include <sofa/core/objectmodel/BaseContext.h>
#include <sofa/helper/gl/template.h>
namespace sofa
{
namespace component
{
namespace mapping
{
template <class BasicMapping>
ArticulatedSystemMapping<BasicMapping>::ArticulatedSystemMapping(In* from, Out* to)
: Inherit(from, to)
, rootModel(NULL), ahc(NULL)
, m_rootModelName(initData(&m_rootModelName, std::string(""), "rootModel", "Root position if a rigid root model is specified."))
{
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::init()
{
GNode* context = dynamic_cast<GNode*>(this->fromModel->getContext());
context->getNodeObject(ahc);
articulationCenters = ahc->getArticulationCenters();
OutVecCoord& xto = *this->toModel->getX();
InVecCoord& xfrom = *this->fromModel->getX();
ArticulationPos.clear();
ArticulationAxis.clear();
ArticulationPos.resize(xfrom.size());
ArticulationAxis.resize(xfrom.size());
if (!m_rootModelName.getValue().empty())
{
std::vector< std::string > tokens(0);
std::string str = m_rootModelName.getValue();
std::string::size_type begin_index = 0;
std::string::size_type end_index = 0;
if (rootModel)
{
serr << "Root Model found : Name = " << rootModel->getName() << sendl;
}
while ( (end_index = str.find("/", begin_index)) != std::string::npos )
{
tokens.push_back(str.substr(begin_index, end_index - begin_index));
begin_index = end_index + 1;
}
tokens.push_back(str.substr(begin_index));
GNode* node = context;
std::vector< std::string >::iterator it = tokens.begin();
std::vector< std::string >::iterator itEnd = tokens.end();
while (it != itEnd)
{
if ( it->compare("..") == 0 )
{
if (node != 0)
node = node->parent;
}
else
{
if (node != 0)
node = node->getChild(*it);
}
++it;
}
if (node != 0)
node->getNodeObject(rootModel);
}
else
{
context->parent->getNodeObject(rootModel);
}
CoordinateBuf.clear();
CoordinateBuf.resize(xfrom.size());
for (unsigned int c=0; c<xfrom.size(); c++)
{
CoordinateBuf[c].x() = 0.0;
}
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator ac = articulationCenters.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator acEnd = articulationCenters.end();
for (; ac != acEnd; ac++)
{
(*ac)->OrientationArticulationCenter.clear();
(*ac)->DisplacementArticulationCenter.clear();
(*ac)->Disp_Rotation.clear();
// sout << "(*ac)->OrientationArticulationCenter : " << (*ac)->OrientationArticulationCenter << sendl;
// todo : warning if a (*a)->articulationIndex.getValue() exceed xfrom size !
}
apply(xto, xfrom, (rootModel==NULL ? NULL : rootModel->getX()));
/*
OutVecDeriv& vto = *this->toModel->getV();
InVecDeriv& vfrom = *this->fromModel->getV();
applyJT(vfrom, vto);
*/
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::reset()
{
init();
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::apply( typename Out::VecCoord& out, const typename In::VecCoord& in, const typename InRoot::VecCoord* inroot )
{
// Copy the root position if a rigid root model is present
if (rootModel)
{
out[0] = (*inroot)[rootModel->getSize()-1];
// sout << "Root Model Name = " << rootModel->getName() << sendl;
// out[0] = (*rootModel->getX())[rootModel->getSize()-1];
}
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator ac = articulationCenters.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator acEnd = articulationCenters.end();
for (; ac != acEnd; ac++)
{
int parent = (*ac)->parentIndex.getValue();
int child = (*ac)->childIndex.getValue();
// Before computing the child position, it is placed with the same orientation than its parent
// and at the position compatible with the definition of the articulation center
// (see initTranslateChild function for details...)
Quat quat_child_buf = out[child].getOrientation();
// The position of the articulation center can be deduced using the 6D position of the parent:
// only useful for visualisation of the mapping => NO ! Used in applyJ and applyJT
(*ac)->globalPosition.setValue(out[parent].getCenter() +
out[parent].getOrientation().rotate((*ac)->posOnParent.getValue()));
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*> articulations = (*ac)->getArticulations();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator a = articulations.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator aEnd = articulations.end();
int process = (*ac)->articulationProcess.getValue();
switch(process) {
case 0: // 0-(default) articulation are treated one by one, the axis of the second articulation is updated by the potential rotation of the first articulation
// potential problems could arise when rotation exceed 90° (known problem of euler angles)
{
// the position of the child is reset to its rest position (based on the postion of the articulation center)
out[child].getOrientation() = out[parent].getOrientation();
out[child].getCenter() = out[parent].getCenter() + (*ac)->initTranslateChild(out[parent].getOrientation());
Vec<3,OutReal> APos;
APos = (*ac)->globalPosition.getValue();
for (; a != aEnd; a++)
{
int ind = (*a)->articulationIndex.getValue();
InCoord value = in[ind];
Vec<3,Real> axis = out[child].getOrientation().rotate((*a)->axis.getValue());
ArticulationAxis[ind] = axis;
if ((*a)->rotation.getValue())
{
Quat dq;
dq.axisToQuat(axis, value.x());
out[child].getCenter() += (*ac)->translateChild(dq, out[child].getOrientation());
out[child].getOrientation() += dq;
}
if ((*a)->translation.getValue())
{
out[child].getCenter() += axis*value.x();
APos += axis*value.x();
}
ArticulationPos[ind]= APos;
}
break;
}
case 1: // the axis of the articulations are linked to the parent - rotations are treated by successive increases -
{
//sout<<"Case 1"<<sendl;
// no reset of the position of the child its position is corrected at the end to respect the articulation center.
for (; a != aEnd; a++)
{
int ind = (*a)->articulationIndex.getValue();
InCoord value = in[ind];
InCoord prev_value = CoordinateBuf[ind];
Vec<3,Real> axis = out[parent].getOrientation().rotate((*a)->axis.getValue());
ArticulationAxis[ind]=axis;
// the increment of rotation and translation are stored in dq and disp
if ((*a)->rotation.getValue() )
{
Quat r;
r.axisToQuat(axis, value.x() - prev_value.x());
// add the contribution into the quaternion that provides the actual orientation of the articulation center
(*ac)->OrientationArticulationCenter+=r;
}
if ((*a)->translation.getValue())
{
(*ac)->DisplacementArticulationCenter+=axis*(value.x() - prev_value.x());
}
}
//// in case 1: the rotation of the axis of the articulation follows the parent -> translation are treated "before":
// step 1: compute the new position of the articulation center and the articulation pos
// rq: the articulation center folows the translations
(*ac)->globalPosition.setValue(out[parent].getCenter() + out[parent].getOrientation().rotate((*ac)->posOnParent.getValue()) + (*ac)->DisplacementArticulationCenter);
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator a = articulations.begin();
for (; a != aEnd; a++)
{
Vec<3,OutReal> APos;
APos = (*ac)->globalPosition.getValue();
ArticulationPos[(*a)->articulationIndex.getValue()]=APos;
}
// step 2: compute the position of the child
out[child].getOrientation() = out[parent].getOrientation() + (*ac)->OrientationArticulationCenter;
out[child].getCenter() = (*ac)->globalPosition.getValue() - out[child].getOrientation().rotate( (*ac)->posOnChild.getValue() );
break;
}
case 2: // the axis of the articulations are linked to the child (previous pos) - rotations are treated by successive increases -
{
//sout<<"Case 2"<<sendl;
// no reset of the position of the child its position is corrected at the end to respect the articulation center.
//Quat dq(0,0,0,1);
Vec<3,Real> disp(0,0,0);
for (; a != aEnd; a++)
{
int ind = (*a)->articulationIndex.getValue();
InCoord value = in[ind];
InCoord prev_value = CoordinateBuf[ind];
Vec<3,Real> axis = quat_child_buf.rotate((*a)->axis.getValue());
ArticulationAxis[ind]=axis;
// the increment of rotation and translation are stored in dq and disp
if ((*a)->rotation.getValue() )
{
Quat r;
r.axisToQuat(axis, value.x() - prev_value.x());
// add the contribution into the quaternion that provides the actual orientation of the articulation center
(*ac)->OrientationArticulationCenter+=r;
}
if ((*a)->translation.getValue())
{
disp += axis*(value.x()) ;
}
//// in case 2: the rotation of the axis of the articulation follows the child -> translation are treated "after"
//// ArticulationPos do not move
Vec<3,OutReal> APos;
APos = (*ac)->globalPosition.getValue();
ArticulationPos[(*a)->articulationIndex.getValue()]=APos;
}
(*ac)->DisplacementArticulationCenter=disp;
out[child].getOrientation() = out[parent].getOrientation() + (*ac)->OrientationArticulationCenter;
out[child].getCenter() = (*ac)->globalPosition.getValue() - out[child].getOrientation().rotate((*ac)->posOnChild.getValue());
out[child].getCenter() += (*ac)->DisplacementArticulationCenter;
break;
}
}
}
//////////////////// buf the actual position of the articulations ////////////////////
CoordinateBuf.clear();
CoordinateBuf.resize(in.size());
for (unsigned int c=0; c<in.size(); c++)
{
CoordinateBuf[c].x() = in[c].x();
}
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::applyJ( typename Out::VecDeriv& out, const typename In::VecDeriv& in, const typename InRoot::VecDeriv* inroot )
{
//sout<<" \n ApplyJ ";
OutVecCoord& xto = *this->toModel->getX();
out.clear();
out.resize(xto.size());
// Copy the root position if a rigid root model is present
if (inroot)
{
// sout << "Root Model Name = " << rootModel->getName() << sendl;
out[0] = (*inroot)[inroot->size()-1];
}
else
out[0] = OutDeriv();
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator ac = articulationCenters.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator acEnd = articulationCenters.end();
int i = 0;
for (; ac != acEnd; ac++)
{
int parent = (*ac)->parentIndex.getValue();
int child = (*ac)->childIndex.getValue();
out[child].getVOrientation() += out[parent].getVOrientation();
Vec<3,OutReal> P = xto[parent].getCenter();
Vec<3,OutReal> C = xto[child].getCenter();
out[child].getVCenter() = out[parent].getVCenter() + cross(P-C, out[parent].getVOrientation());
//sout<<"P:"<< P <<"- C: "<< C;
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*> articulations = (*ac)->getArticulations();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator a = articulations.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator aEnd = articulations.end();
for (; a != aEnd; a++)
{
int ind = (*a)->articulationIndex.getValue();
InCoord value = in[ind];
Vec<3,OutReal> axis = ArticulationAxis[ind];
Vec<3,OutReal> A = ArticulationPos[ind];
if ((*a)->rotation.getValue())
{
out[child].getVCenter() += cross(A-C, axis*value.x());
out[child].getVOrientation() += axis*value.x();
}
if ((*a)->translation.getValue())
{
out[child].getVCenter() += axis*value.x();
}
i++;
}
}
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::applyJT( typename In::VecDeriv& out, const typename Out::VecDeriv& in, typename InRoot::VecDeriv* outroot )
{
//sout<<"\n ApplyJt";
OutVecCoord& xto = *this->toModel->getX();
// InVecCoord &xfrom= *this->fromModel->getX();
//apply(xto,xfrom);
OutVecDeriv fObjects6DBuf = in;
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator ac = articulationCenters.end();
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator acBegin = articulationCenters.begin();
int i=ArticulationAxis.size();
while (ac != acBegin)
{
ac--;
int parent = (*ac)->parentIndex.getValue();
int child = (*ac)->childIndex.getValue();
fObjects6DBuf[parent].getVCenter() += fObjects6DBuf[child].getVCenter();
Vec<3,OutReal> P = xto[parent].getCenter();
Vec<3,OutReal> C = xto[child].getCenter();
fObjects6DBuf[parent].getVOrientation() += fObjects6DBuf[child].getVOrientation() + cross(C-P, fObjects6DBuf[child].getVCenter());
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*> articulations = (*ac)->getArticulations();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator a = articulations.end();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator aBegin = articulations.begin();
while (a != aBegin)
{
a--;
i--;
int ind = (*a)->articulationIndex.getValue();
Vec<3,OutReal> axis = ArticulationAxis[ind];
Vec<3,Real> A = ArticulationPos[ind] ;
OutDeriv T;
T.getVCenter() = fObjects6DBuf[child].getVCenter();
T.getVOrientation() = fObjects6DBuf[child].getVOrientation() + cross(C-A, fObjects6DBuf[child].getVCenter());
if ((*a)->rotation.getValue())
{
out[ind].x() += (Real)dot(axis, T.getVOrientation());
}
if ((*a)->translation.getValue())
{
out[ind].x() += (Real)dot(axis, T.getVCenter());
}
}
}
if (outroot)
{
(*outroot)[outroot->size()-1] += fObjects6DBuf[0];
}
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::applyJT( typename In::VecConst& out, const typename Out::VecConst& in, typename InRoot::VecConst* outRoot )
{
// sout << "ApplyJT const - size in = " << in.size() << sendl;
OutVecCoord& xto = *this->toModel->getX();
out.resize(in.size());
unsigned int sizeOutRoot =0;
if (rootModel!=NULL)
{
sizeOutRoot = outRoot->size();
outRoot->resize(in.size() + sizeOutRoot); // the constraints are all transmitted to the root
}
for(unsigned int i=0; i<in.size(); i++)
{
OutConstraintIterator itOut;
for (itOut=in[i].getData().begin();itOut!=in[i].getData().end();itOut++)
{
int childIndex = itOut->first;
const OutDeriv valueConst = (OutDeriv) itOut->second;
Vec<3,OutReal> C = xto[childIndex].getCenter();
vector<ArticulatedHierarchyContainer::ArticulationCenter*> ACList = ahc->getAcendantList(childIndex);
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator ac = ACList.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator acEnd = ACList.end();
int ii=0;
for (; ac != acEnd; ac++)
{
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*> articulations = (*ac)->getArticulations();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator a = articulations.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator aEnd = articulations.end();
for (; a != aEnd; a++)
{
int ind= (*a)->articulationIndex.getValue();
InDeriv data;
Vec<3,OutReal> axis = ArticulationAxis[ind]; // xto[parent].getOrientation().rotate((*a)->axis.getValue());
Vec<3,Real> A = ArticulationPos[ind] ; // Vec<3,OutReal> posAc = (*ac)->globalPosition.getValue();
OutDeriv T;
T.getVCenter() = valueConst.getVCenter();
T.getVOrientation() = valueConst.getVOrientation() + cross(C - A, valueConst.getVCenter());
if ((*a)->rotation.getValue())
{
data = (Real)dot(axis, T.getVOrientation());
}
if ((*a)->translation.getValue())
{
data = (Real)dot(axis, T.getVCenter());
//printf("\n weightedNormalArticulation : %f", constArt.data);
}
out[i].insert(ind,data);
ii++;
}
}
if (rootModel!=NULL)
{
unsigned int indexT = rootModel->getSize()-1; // On applique sur le dernier noeud
Vec<3,OutReal> posRoot = xto[indexT].getCenter();
OutDeriv T;
T.getVCenter() = valueConst.getVCenter();
T.getVOrientation() = valueConst.getVOrientation() + cross(C - posRoot, valueConst.getVCenter());
(*outRoot)[sizeOutRoot+i].insert(indexT,T);
//sout<< "constraintT = data : "<< T << "index : "<< indexT<<sendl;
//(*outRoot)[i].push_back(constraintT);
// sout<< "constraintT = data : "<< T << "index : "<< indexT<<sendl;
}
}
}
// sout<<"End ApplyJT const"<<sendl;
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::propagateX()
{
if (this->fromModel!=NULL && this->toModel->getX()!=NULL && this->fromModel->getX()!=NULL)
apply(*this->toModel->getX(), *this->fromModel->getX(), (rootModel==NULL ? NULL : rootModel->getX()));
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::propagateXfree()
{
if (this->fromModel!=NULL && this->toModel->getXfree()!=NULL && this->fromModel->getXfree()!=NULL)
apply(*this->toModel->getXfree(), *this->fromModel->getXfree(), (rootModel==NULL ? NULL : rootModel->getXfree()));
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::propagateV()
{
if (this->fromModel!=NULL && this->toModel->getV()!=NULL && this->fromModel->getV()!=NULL)
applyJ(*this->toModel->getV(), *this->fromModel->getV(), (rootModel==NULL ? NULL : rootModel->getV()));
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::propagateDx()
{
if (this->fromModel!=NULL && this->toModel->getDx()!=NULL && this->fromModel->getDx()!=NULL)
applyJ(*this->toModel->getDx(), *this->fromModel->getDx(), (rootModel==NULL ? NULL : rootModel->getDx()));
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::accumulateForce()
{
if (this->fromModel!=NULL && this->toModel->getF()!=NULL && this->fromModel->getF()!=NULL)
applyJT(*this->fromModel->getF(), *this->toModel->getF(), (rootModel==NULL ? NULL : rootModel->getF()));
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::accumulateDf()
{
if (this->fromModel!=NULL && this->toModel->getF()!=NULL && this->fromModel->getF()!=NULL)
applyJT(*this->fromModel->getF(), *this->toModel->getF(), (rootModel==NULL ? NULL : rootModel->getF()));
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::accumulateConstraint()
{
if (this->fromModel!=NULL && this->toModel->getC()!=NULL && this->fromModel->getC()!=NULL)
{
applyJT(*this->fromModel->getC(), *this->toModel->getC(), (rootModel==NULL ? NULL : rootModel->getC()));
// Accumulate contacts indices through the MechanicalMapping
std::vector<unsigned int>::iterator it = this->toModel->getConstraintId().begin();
std::vector<unsigned int>::iterator itEnd = this->toModel->getConstraintId().end();
while (it != itEnd)
{
this->fromModel->setConstraintId(*it);
// in case of a "multi-mapping" (the articulation system is placede on a simulated object)
// the constraints are transmitted to the rootModle (the <rigidtype> object which is the root of the articulated system)
if (rootModel!=NULL)
rootModel->setConstraintId(*it);
it++;
}
}
}
template <class BasicMapping>
void ArticulatedSystemMapping<BasicMapping>::draw()
{
if (!this->getShow()) return;
std::vector< Vector3 > points;
std::vector< Vector3 > pointsLine;
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator ac = articulationCenters.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter*>::const_iterator acEnd = articulationCenters.end();
unsigned int i=0;
for (; ac != acEnd; ac++)
{
// int parent = (*ac)->parentIndex.getValue();
// int child = (*ac)->childIndex.getValue();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*> articulations = (*ac)->getArticulations();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator a = articulations.begin();
vector<ArticulatedHierarchyContainer::ArticulationCenter::Articulation*>::const_iterator aEnd = articulations.end();
for (; a != aEnd; a++)
{
// Articulation Pos and Axis are based on the configuration of the parent
int ind= (*a)->articulationIndex.getValue();
points.push_back(ArticulationPos[ind]);
pointsLine.push_back(ArticulationPos[ind]);
Vec<3,OutReal> Pos_axis = ArticulationPos[ind] + ArticulationAxis[ind];
pointsLine.push_back(Pos_axis);
i++;
}
}
simulation::getSimulation()->DrawUtility.drawPoints(points, 10, Vec<4,float>(1,0.5,0.5,1));
simulation::getSimulation()->DrawUtility.drawLines(pointsLine, 1, Vec<4,float>(0,0,1,1));
//
//OutVecCoord& xto = *this->toModel->getX();
//glDisable (GL_LIGHTING);
//glPointSize(2);
}
} // namespace mapping
} // namespace component
} // namespace sofa
#endif
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