/usr/include/sbml/packages/fbc/util/CobraToFbcConverter.h is in libsbml5-dev 5.10.0+dfsg-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 | /**
* @file CobraToFbcConverter.h
* @brief Definition of a cobra 2 fbc converter.
* @author Frank T. Bergmann
*
* <!--------------------------------------------------------------------------
* This file is part of libSBML. Please visit http://sbml.org for more
* information about SBML, and the latest version of libSBML.
*
* Copyright (C) 2013-2014 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
* 3. University of Heidelberg, Heidelberg, Germany
*
* Copyright (C) 2009-2013 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
*
* This library is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation. A copy of the license agreement is provided
* in the file named "LICENSE.txt" included with this software distribution
* and also available online as http://sbml.org/software/libsbml/license.html
* ---------------------------------------------------------------------- -->
*
* @class CobraToFbcConverter
* @sbmlbrief{fbc} Implementation of a COBRA to SBML Level 3 'fbc' package
* converter.
*/
#ifndef CobraToFbcConverter_h
#define CobraToFbcConverter_h
#include <sbml/common/extern.h>
#include <sbml/SBMLNamespaces.h>
#include <sbml/conversion/SBMLConverter.h>
#include <sbml/conversion/SBMLConverterRegister.h>
#ifdef __cplusplus
LIBSBML_CPP_NAMESPACE_BEGIN
class LIBSBML_EXTERN CobraToFbcConverter : public SBMLConverter
{
public:
/** @cond doxygenLibsbmlInternal */
/* register with the ConversionRegistry */
static void init();
/** @endcond */
/**
* Constructor.
*/
CobraToFbcConverter();
/**
* Copy constructor.
*/
CobraToFbcConverter(const CobraToFbcConverter&);
/**
* Creates and returns a deep copy of this CobraToFbcConverter.
*
* @return a (deep) copy of this CobraToFbcConverter.
*/
virtual SBMLConverter* clone() const;
/**
* Destroy this CobraToFbcConverter object.
*/
virtual ~CobraToFbcConverter ();
/**
* This function determines whether a given converter matches the
* configuration properties given.
*
* @param props the properties to match
*
* @return <c>true</c> if this converter is a match, <c>false</c> otherwise.
*/
virtual bool matchesProperties(const ConversionProperties &props) const;
/**
* the actual conversion
*
* @return status code represeting success/failure/conversion impossible
*/
virtual int convert();
/**
* Returns the default properties of this converter.
*
* A given converter exposes one or more properties that can be adjusted
* in order to influence the behavior of the converter. This method
* returns the @em default property settings for this converter. It is
* meant to be called in order to discover all the settings for the
* converter object.
*
* The properties for the CobraToFbcConverter are:
* "convert cobra" - the name of this converter
*
* @return the ConversionProperties object describing the default properties
* for this converter.
*/
virtual ConversionProperties getDefaultProperties() const;
};
LIBSBML_CPP_NAMESPACE_END
#endif /* __cplusplus */
#ifndef SWIG
LIBSBML_CPP_NAMESPACE_BEGIN
BEGIN_C_DECLS
END_C_DECLS
LIBSBML_CPP_NAMESPACE_END
#endif /* !SWIG */
#endif /* CobraToFbcConverter_h*/
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