This file is indexed.

/usr/include/sbml/math/FormulaParser.h is in libsbml5-dev 5.10.0+dfsg-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
/**
 * @file    FormulaParser.h
 * @brief   Parses an SBML formula string into an AST.
 * @author  Ben Bornstein
 * 
 * <!--------------------------------------------------------------------------
 * This file is part of libSBML.  Please visit http://sbml.org for more
 * information about SBML, and the latest version of libSBML.
 *
 * Copyright (C) 2013-2014 jointly by the following organizations:
 *     1. California Institute of Technology, Pasadena, CA, USA
 *     2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
 *     3. University of Heidelberg, Heidelberg, Germany
 *
 * Copyright (C) 2009-2013 jointly by the following organizations: 
 *     1. California Institute of Technology, Pasadena, CA, USA
 *     2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
 *  
 * Copyright (C) 2006-2008 by the California Institute of Technology,
 *     Pasadena, CA, USA 
 *  
 * Copyright (C) 2002-2005 jointly by the following organizations: 
 *     1. California Institute of Technology, Pasadena, CA, USA
 *     2. Japan Science and Technology Agency, Japan
 * 
 * This library is free software; you can redistribute it and/or modify it
 * under the terms of the GNU Lesser General Public License as published by
 * the Free Software Foundation.  A copy of the license agreement is provided
 * in the file named "LICENSE.txt" included with this software distribution and
 * also available online as http://sbml.org/software/libsbml/license.html
 * ---------------------------------------------------------------------- -->*/

#ifndef FormulaParser_h
#define FormulaParser_h


#include <sbml/common/extern.h>
#include <sbml/util/Stack.h>

#include <sbml/math/ASTNode.h>
#include <sbml/math/FormulaTokenizer.h>

LIBSBML_CPP_NAMESPACE_BEGIN
BEGIN_C_DECLS


/**
 * Parses the given SBML formula and returns a representation of it as an
 * Abstract Syntax Tree (AST).
 *
 * @copydetails doc_summary_of_string_math 
 *
 * @copydetails doc_warning_L1_math_string_syntax
 * 
 * @param formula the text-string formula expression to be parsed
 *
 * @return the root node of the AST corresponding to the @p formula, or @c
 * NULL if an error occurred in parsing the formula
 *
 * @if clike @see SBML_formulaToString()
 * @see SBML_parseL3FormulaWithSettings()
 * @see SBML_parseL3Formula()
 * @see SBML_parseL3FormulaWithModel()
 * @see SBML_getLastParseL3Error()
 * @see SBML_getDefaultL3ParserSettings()
 * @endif@~
 * @if csharp @see SBML_formulaToString()
 * @see SBML_parseL3FormulaWithSettings()
 * @see SBML_parseL3Formula()
 * @see SBML_parseL3FormulaWithModel()
 * @see SBML_getLastParseL3Error()
 * @see SBML_getDefaultL3ParserSettings()
 * @endif@~
 * @if python @see libsbml.formulaToString()
 * @see libsbml.parseL3FormulaWithSettings()
 * @see libsbml.parseL3Formula()
 * @see libsbml.parseL3FormulaWithModel()
 * @see libsbml.getLastParseL3Error()
 * @see libsbml.getDefaultL3ParserSettings()
 * @endif@~
 * @if java @see <code><a href="libsbml.html#formulaToString(org.sbml.libsbml.ASTNode tree)">libsbml.formulaToString(ASTNode tree)</a></code>
 * @see <code><a href="libsbml.html#parseL3FormulaWithSettings(java.lang.String, org.sbml.libsbml.L3ParserSettings)">libsbml.parseL3FormulaWithSettings(String formula, L3ParserSettings settings)</a></code>
 * @see <code><a href="libsbml.html#parseL3Formula(java.lang.String)">libsbml.parseL3Formula(String formula)</a></code>
 * @see <code><a href="libsbml.html#parseL3FormulaWithModel(java.lang.String, org.sbml.libsbml.Model)">parseL3FormulaWithModel(String formula, Model model)</a></code>
 * @see <code><a href="libsbml.html#getLastParseL3Error()">getLastParseL3Error()</a></code>
 * @see <code><a href="libsbml.html#getDefaultL3ParserSettings()">getDefaultL3ParserSettings()</a></code>
 * @endif@~
 *
 * @if conly
 * @memberof ASTNode_t
 * @endif
 */
LIBSBML_EXTERN
ASTNode_t *
SBML_parseFormula (const char *formula);


/** @cond doxygenLibsbmlInternal */

#ifndef SWIG


/**
 * @return the action for the current state and token.
 *
 * ACCEPT_STATE and ERROR_STATE are special and should be tested for first.
 *
 * Postive actions less-than represent shifts.  Negative actions greater
 * than represent reductions by a grammar rule.
 */
long
FormulaParser_getAction (long state, Token_t *token);

/**
 * @return the number of consective tokens in the Action[] table for the
 * given token type.
 *
 * This function is machine-generated.  DO NOT EDIT.
 */
long
FormulaParser_getActionLength (TokenType_t type);

/**
 * @return the starting offset into the Action[] table for the given token
 * type.
 *
 * This function is machine-generated.  DO NOT EDIT.
 */
long
FormulaParser_getActionOffset (TokenType_t type);

/**
 * @return the next (or goto) state for the current state and grammar rule.
 *
 * ERROR_STATE is special and should be tested for first.
 */
long
FormulaParser_getGoto (long state, long rule);

/**
 * Reduces the given stack (containing SLR parser states and ASTNodes) by
 * the given grammar rule.
 */
ASTNode_t *
FormulaParser_reduceStackByRule (Stack_t *stack, long rule);


#endif  /* !SWIG */

END_C_DECLS
LIBSBML_CPP_NAMESPACE_END

/** @endcond */

#endif  /* FormulaParser_h */