/usr/lib/emboss/include/ajtax.h is in emboss-lib 6.6.0+dfsg-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 | /* @include ajtax *************************************************************
**
** AJAX taxonomy functions
**
** These functions control all aspects of AJAX taxonomy
** parsing and include simple utilities.
**
** @author Copyright (C) 2010 Peter Rice
** @version $Revision: 1.12 $
** @modified Oct 5 pmr First version
** @modified $Date: 2011/10/18 14:23:41 $ by $Author: rice $
** @@
**
** This library is free software; you can redistribute it and/or
** modify it under the terms of the GNU Lesser General Public
** License as published by the Free Software Foundation; either
** version 2.1 of the License, or (at your option) any later version.
**
** This library is distributed in the hope that it will be useful,
** but WITHOUT ANY WARRANTY; without even the implied warranty of
** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
** Lesser General Public License for more details.
**
** You should have received a copy of the GNU Lesser General Public
** License along with this library; if not, write to the Free Software
** Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
** MA 02110-1301, USA.
**
******************************************************************************/
#ifndef AJTAX_H
#define AJTAX_H
/* ========================================================================= */
/* ============================= include files ============================= */
/* ========================================================================= */
#include "ajdefine.h"
#include "ajtaxdata.h"
AJ_BEGIN_DECLS
/* ========================================================================= */
/* =============================== constants =============================== */
/* ========================================================================= */
/* ========================================================================= */
/* ============================== public data ============================== */
/* ========================================================================= */
/* ========================================================================= */
/* =========================== public functions ============================ */
/* ========================================================================= */
/*
** Prototype definitions
*/
AjPTax ajTaxNew(void);
AjPTax ajTaxNewTax(const AjPTax tax);
void ajTaxDel(AjPTax *Ptax);
void ajTaxClear(AjPTax tax);
const AjPStr ajTaxGetDb(const AjPTax tax);
const AjPStr ajTaxGetId(const AjPTax tax);
const AjPStr ajTaxGetName(const AjPTax tax);
ajuint ajTaxGetParent(const AjPTax tax);
const char* ajTaxGetQryC(const AjPTax tax);
const AjPStr ajTaxGetQryS(const AjPTax tax);
const AjPStr ajTaxGetRank(const AjPTax tax);
ajuint ajTaxGetTree(const AjPTax tax, AjPList taxlist);
AjBool ajTaxIsHidden(const AjPTax tax);
AjBool ajTaxIsSpecies(const AjPTax tax);
AjPTaxcit ajTaxcitNew(void);
void ajTaxcitDel(AjPTaxcit *Pcit);
AjPTaxcode ajTaxcodeNew(void);
AjPTaxdel ajTaxdelNew(void);
AjPTaxdiv ajTaxdivNew(void);
AjPTaxmerge ajTaxmergeNew(void);
AjPTaxname ajTaxnameNew(void);
AjPTaxname ajTaxnameNewName(const AjPTaxname name);
void ajTaxnameDel(AjPTaxname *Pname);
void ajTaxExit(void);
/*
** End of prototype definitions
*/
AJ_END_DECLS
#endif /* !AJTAX_H */
|