This file is indexed.

/usr/include/code_saturne/fvm_nodal.h is in code-saturne-include 3.3.2-4.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
#ifndef __FVM_NODAL_H__
#define __FVM_NODAL_H__

/*============================================================================
 * Main structure for a nodal representation associated with a mesh
 *============================================================================*/

/*
  This file is part of Code_Saturne, a general-purpose CFD tool.

  Copyright (C) 1998-2014 EDF S.A.

  This program is free software; you can redistribute it and/or modify it under
  the terms of the GNU General Public License as published by the Free Software
  Foundation; either version 2 of the License, or (at your option) any later
  version.

  This program is distributed in the hope that it will be useful, but WITHOUT
  ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
  FOR A PARTICULAR PURPOSE.  See the GNU General Public License for more
  details.

  You should have received a copy of the GNU General Public License along with
  this program; if not, write to the Free Software Foundation, Inc., 51 Franklin
  Street, Fifth Floor, Boston, MA 02110-1301, USA.
*/

/*----------------------------------------------------------------------------*/

#include "cs_defs.h"

/*----------------------------------------------------------------------------
 *  Local headers
 *----------------------------------------------------------------------------*/

#include "fvm_defs.h"
#include "fvm_group.h"
#include "fvm_io_num.h"

/*----------------------------------------------------------------------------*/

BEGIN_C_DECLS

/*=============================================================================
 * Macro definitions
 *============================================================================*/

/*============================================================================
 * Type definitions
 *============================================================================*/

/*----------------------------------------------------------------------------
 * Structure defining a mesh in nodal definition
 *----------------------------------------------------------------------------*/

typedef struct _fvm_nodal_t fvm_nodal_t;

/*=============================================================================
 * Static global variables
 *============================================================================*/

/* Number of vertices associated with each "nodal" element type */

extern const int  fvm_nodal_n_vertices_element[];

/*=============================================================================
 * Public function prototypes
 *============================================================================*/

/*----------------------------------------------------------------------------
 * Creation of a nodal mesh representation structure.
 *
 * parameters:
 *   name <-- name that should be assigned to the nodal mesh
 *   dim  <-- spatial dimension
 *
 * returns:
 *  pointer to created nodal mesh representation structure
 *----------------------------------------------------------------------------*/

fvm_nodal_t *
fvm_nodal_create(const char  *name,
                 int          dim);

/*----------------------------------------------------------------------------
 * Destruction of a nodal mesh representation structure.
 *
 * parameters:
 *   this_nodal  <-> pointer to structure that should be destroyed
 *
 * returns:
 *  NULL pointer
 *----------------------------------------------------------------------------*/

fvm_nodal_t *
fvm_nodal_destroy(fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------
 * Copy a nodal mesh representation structure, sharing arrays with the
 * original structure.
 *
 * parameters:
 *   this_nodal  <-> pointer to structure that should be copied
 *
 * returns:
 *   pointer to created nodal mesh representation structure
 *----------------------------------------------------------------------------*/

fvm_nodal_t *
fvm_nodal_copy(const fvm_nodal_t *this_nodal);

/*----------------------------------------------------------------------------
 * Reduction of a nodal mesh representation structure: only the associations
 * (numberings) necessary to redistribution of fields for output are
 * conserved, the full connectivity being in many cases no longer useful
 * once it has been output. If the del_vertex_num value is set
 * to true, vertex-based values may not be output in parallel mode
 * after this function is called.
 *
 * parameters:
 *   this_nodal        <-> pointer to structure that should be reduced
 *   del_vertex_num    <-- indicates if vertex parent indirection and
 *                         I/O numbering are destroyed (1) or not (0)
 *----------------------------------------------------------------------------*/

void
fvm_nodal_reduce(fvm_nodal_t  *this_nodal,
                 int           del_vertex_num);

/*----------------------------------------------------------------------------
 * Change entity parent numbering; this is useful when entities of the
 * parent mesh have been renumbered after a nodal mesh representation
 * structure's creation.
 *
 * parameters:
 *   this_nodal          <-- nodal mesh structure
 *   new_parent_num      <-- pointer to local parent renumbering array
 *                           ({1, ..., n} <-- {1, ..., n})
 *   entity_dim          <-- 3 for cells, 2 for faces, 1 for edges,
 *                           and 0 for vertices
 *----------------------------------------------------------------------------*/

void
fvm_nodal_change_parent_num(fvm_nodal_t        *this_nodal,
                            const cs_lnum_t     new_parent_num[],
                            int                 entity_dim);

/*----------------------------------------------------------------------------
 * Remove entity parent numbering; this is useful for example when we
 * want to assign coordinates or fields to an extracted mesh using
 * arrays relative to the mesh, and not to its parent.
 *
 * This is equivalent to calling fvm_nodal_change_parent_num(), with
 * 'trivial' (1 o n) new_parent_num[] values.
 *
 * parameters:
 *   this_nodal          <-- nodal mesh structure
 *   entity_dim          <-- 3 for cells, 2 for faces, 1 for edges,
 *                           and 0 for vertices
 *----------------------------------------------------------------------------*/

void
fvm_nodal_remove_parent_num(fvm_nodal_t  *this_nodal,
                            int           entity_dim);

/*----------------------------------------------------------------------------
 * Build external numbering for entities based on global numbers.
 *
 * parameters:
 *   this_nodal           <-- nodal mesh structure
 *   parent_global_number <-- pointer to list of global (i.e. domain splitting
 *                            independent) parent entity numbers
 *   entity_dim           <-- 3 for cells, 2 for faces, 1 for edges,
 *                            and 0 for vertices
 *----------------------------------------------------------------------------*/

void
fvm_nodal_init_io_num(fvm_nodal_t        *this_nodal,
                      const cs_gnum_t     parent_global_numbers[],
                      int                 entity_dim);

/*----------------------------------------------------------------------------
 * Preset number and list of vertices to assign to a nodal mesh.
 *
 * If the parent_vertex_num argument is NULL, the list is assumed to
 * be {1, 2, ..., n}. If parent_vertex_num is given, it specifies a
 * list of n vertices from a larger set (1 to n numbering).
 *
 * Ownership of the given parent vertex numbering array is
 * transferred to the nodal mesh representation structure.
 *
 * This function should be called before fvm_nodal_set_shared_vertices()
 * or fvm_nodal_transfer_vertices() if we want to force certain
 * vertices to appear in the mesh (especially if we want to define
 * a mesh containing only vertices).
 *
 * parameters:
 *   this_nodal        <-> nodal mesh structure
 *   n_vertices        <-- number of vertices to assign
 *   parent_vertex_num <-- parent numbers of vertices to assign
 *----------------------------------------------------------------------------*/

void
fvm_nodal_define_vertex_list(fvm_nodal_t  *this_nodal,
                             cs_lnum_t     n_vertices,
                             cs_lnum_t     parent_vertex_num[]);

/*----------------------------------------------------------------------------
 * Assign shared vertex coordinates to an extracted nodal mesh,
 * renumbering vertex numbers based on those really referenced,
 * and updating connectivity arrays in accordance.
 *
 * This function should be called once all element sections have
 * been added to a nodal mesh representation.
 *
 * parameters:
 *   this_nodal      <-> nodal mesh structure
 *   vertex_coords   <-- coordinates of parent vertices (interlaced)
 *----------------------------------------------------------------------------*/

void
fvm_nodal_set_shared_vertices(fvm_nodal_t       *this_nodal,
                              const cs_coord_t   vertex_coords[]);

/*----------------------------------------------------------------------------
 * Assign private vertex coordinates to a nodal mesh,
 * renumbering vertex numbers based on those really referenced,
 * and updating connectivity arrays in accordance.
 *
 * Ownership of the given coordinates array is transferred to
 * the nodal mesh representation structure.
 *
 * This function should only be called once all element sections
 * have been added to a nodal mesh representation.
 *
 * parameters:
 *   this_nodal      <-> nodal mesh structure
 *   vertex_coords   <-- coordinates of parent vertices (interlaced)
 *
 * returns:
 *   updated pointer to vertex_coords (may be different from initial
 *   argument if vertices were renumbered).
 *----------------------------------------------------------------------------*/

cs_coord_t *
fvm_nodal_transfer_vertices(fvm_nodal_t  *this_nodal,
                            cs_coord_t    vertex_coords[]);

/*----------------------------------------------------------------------------
 * Make vertex coordinates of a nodal mesh private.
 *
 * If vertex coordinates were previously shared, those coordinates that
 * are actually refernces are copied, and the relation to parent vertices
 * is discarded.
 *
 * If vertices were already private, the mesh is not modified.
 *
 * parameters:
 *   this_nodal <-> nodal mesh structure
 *----------------------------------------------------------------------------*/

void
fvm_nodal_make_vertices_private(fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------
 * Assign group class set descriptions to a nodal mesh.
 *
 * The structure builds its own copy of the group class sets,
 * renumbering them so as to discard those not referenced.
 * Empty group classes are also renumbered to zero.
 *
 * This function should only be called once all element sections
 * have been added to a nodal mesh representation.
 *
 * parameters:
 *   this_nodal <-> nodal mesh structure
 *   gc_set     <-- group class set descriptions
 *----------------------------------------------------------------------------*/

void
fvm_nodal_set_group_class_set(fvm_nodal_t                  *this_nodal,
                              const fvm_group_class_set_t  *gc_set);

/*----------------------------------------------------------------------------
 * Obtain the name of a nodal mesh.
 *
 * parameters:
 *   this_nodal           <-- pointer to nodal mesh structure
 *
 * returns:
 *   pointer to constant string containing the mesh name
 *----------------------------------------------------------------------------*/

const char *
fvm_nodal_get_name(const fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------
 * Return spatial dimension of the nodal mesh.
 *
 * parameters:
 *   this_nodal <-- pointer to nodal mesh structure
 *
 * returns:
 *  spatial dimension
 *----------------------------------------------------------------------------*/

int
fvm_nodal_get_dim(const fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------
 * Return maximum dimension of entities in a nodal mesh.
 *
 * parameters:
 *   this_nodal <-- pointer to nodal mesh structure
 *
 * returns:
 *  maximum dimension of entities in mesh (0 to 3)
 *----------------------------------------------------------------------------*/

int
fvm_nodal_get_max_entity_dim(const fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------
 * Return number of entities of a given dimension in a nodal mesh.
 *
 * parameters:
 *   this_nodal <-- pointer to nodal mesh structure
 *   entity_dim <-- dimension of entities we want to count (0 to 3)
 *
 * returns:
 *  number of entities of given dimension in mesh
 *----------------------------------------------------------------------------*/

cs_lnum_t
fvm_nodal_get_n_entities(const fvm_nodal_t  *this_nodal,
                         int                 entity_dim);

/*----------------------------------------------------------------------------
 * Return global number of vertices associated with nodal mesh.
 *
 * parameters:
 *   this_nodal           <-- pointer to nodal mesh structure
 *
 * returns:
 *   global number of vertices associated with nodal mesh
 *----------------------------------------------------------------------------*/

cs_gnum_t
fvm_nodal_get_n_g_vertices(const fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------
 * Return global number of elements of a given type associated with nodal mesh.
 *
 * parameters:
 *   this_nodal           <-- pointer to nodal mesh structure
 *   element_type         <-- type of elements for query
 *
 * returns:
 *   global number of elements of the given type associated with nodal mesh
 *----------------------------------------------------------------------------*/

cs_gnum_t
fvm_nodal_get_n_g_elements(const fvm_nodal_t  *this_nodal,
                           fvm_element_t       element_type);

/*----------------------------------------------------------------------------
 * Return local number of elements of a given type associated with nodal mesh.
 *
 * parameters:
 *   this_nodal           <-- pointer to nodal mesh structure
 *   element_type         <-- type of elements for query
 *
 * returns:
 *   local number of elements of the given type associated with nodal mesh
 *----------------------------------------------------------------------------*/

cs_lnum_t
fvm_nodal_get_n_elements(const fvm_nodal_t  *this_nodal,
                         fvm_element_t       element_type);

/*----------------------------------------------------------------------------
 * Return local parent numbering array for all entities of a given
 * dimension in a nodal mesh.
 *
 * The number of entities of the given dimension may be obtained
 * through fvm_nodal_get_n_entities(), the parent_num[] array is populated
 * with the parent entity numbers of those entities, in order (i.e. in
 * local section order, section by section).
 *
 * parameters:
 *   this_nodal <-- pointer to nodal mesh structure
 *   entity_dim <-- dimension of entities we are interested in (0 to 3)
 *   parent_num --> entity parent numbering (array must be pre-allocated)
 *----------------------------------------------------------------------------*/

void
fvm_nodal_get_parent_num(const fvm_nodal_t  *this_nodal,
                         int                 entity_dim,
                         cs_lnum_t           parent_num[]);

/*----------------------------------------------------------------------------
 * Compute tesselation a a nodal mesh's sections of a given type, and add the
 * corresponding structure to the mesh representation.
 *
 * If global element numbers are used (i.e. in parallel mode), this function
 * should be only be used after calling fvm_nodal_init_io_num().
 *
 * If some mesh sections have already been tesselated, their tesselation
 * is unchanged.
 *
 * parameters:
 *   this_nodal  <-> pointer to nodal mesh structure
 *   type        <-> element type that should be tesselated
 *   error_count --> number of elements with a tesselation error
 *                   counter (optional)
 *----------------------------------------------------------------------------*/

void
fvm_nodal_tesselate(fvm_nodal_t    *this_nodal,
                    fvm_element_t   type,
                    cs_lnum_t      *error_count);

/*----------------------------------------------------------------------------
 * Build a nodal representation structure based on extraction of a
 * mesh's edges.
 *
 * parameters:
 *   name        <-- name to assign to extracted mesh
 *   this_nodal  <-> pointer to nodal mesh structure
 *----------------------------------------------------------------------------*/

fvm_nodal_t *
fvm_nodal_copy_edges(const char         *name,
                     const fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------
 * Dump printout of a nodal representation structure.
 *
 * parameters:
 *   this_nodal <-- pointer to structure that should be dumped
 *----------------------------------------------------------------------------*/

void
fvm_nodal_dump(const fvm_nodal_t  *this_nodal);

/*----------------------------------------------------------------------------*/

END_C_DECLS

#endif /* __FVM_NODAL_H__ */