/usr/bin/rivet-chopbins is in rivet 1.8.3-1.1.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 | #! /usr/bin/env python
"""%prog -b <HISTO/PATH:min:max> [ -b ... ] <AIDAFILE> [...]
Strip specified bins from data sets. Histograms not specified will be passed
through without any chopping. Bins to be kept can be specified on command
line via `-b' options. The format is
-b AIDAPATH:start:stop
where start and stop are x values contained in the first and last bins,
respectively, that should be kept. They need not to be the bin-center but
must only lie somewhere in the bin's x-range.
To chop bins from different observables can be achieved by using the `-b'
option multiple times.
Example:
%prog -b /ALEPH_1996_S3486095/d03-x01-y01:0.095:0.27 out.aida
This will give you the all bins of the ALEPH 1-T distribution that are
between the bins that contain the x-values 0.095 and 0.27 .
TODO:
* what if the same observable is mentioned multiple times?
"""
import sys
if sys.version_info[:3] < (2,4,0):
print "rivet scripts require Python version >= 2.4.0... exiting"
sys.exit(1)
import os, logging
import lighthisto
## Try to load faster but non-standard cElementTree module
try:
import xml.etree.cElementTree as ET
except ImportError:
try:
import cElementTree as ET
except ImportError:
try:
import xml.etree.ElementTree as ET
except:
sys.stderr.write("Can't load the ElementTree XML parser: please install it!\n")
sys.exit(1)
def getBindef(line):
""" Try to read bin definitions (xlow, xhigh) from single
string.
"""
splitline = line.strip().split()
try:
path, low, high = splitline[0].split(":")
except:
logging.error("No bin-definition given for %s" % (line.strip()))
sys.exit(1)
if low == "":
low = None
else:
low = float(low)
if high == "":
high = None
else:
high = float(high)
return (path, low, high)
def readObservableFile(obsfile):
""" Read observables to normalise from file obsfile.
Return-values are a list of the histo-names to normalise and a
dictionary with name:newarea entries.
"""
bindefs = {}
if obsfile is not None:
try:
f = open(obsfile, 'r')
except:
logging.error("Cannot open histo list file %s" % opts.OBSFILE)
sys.exit(2)
for line in f:
stripped = line.strip()
# Skip empty or commented lines
if len(stripped) == 0 or stripped.startswith("#"):
continue
# Split the line to find out whether newarea is given in obsfile
path, low, high = getBindef(line)
bindefs[path] = (low, high)
f.close()
return bindefs
if __name__ == "__main__":
from optparse import OptionParser, OptionGroup
parser = OptionParser(usage=__doc__)
parser.add_option("-b", "--bins",
action="append",
help="Specify a histogram and bin range that is to be"
" kept. The format is `AIDAPATH:start:stop'.")
parser.add_option("-O", "--obsfile", default=None,
help="Specify a file with bin-definitions to chop")
parser.add_option("-o", "--out",
dest="outdir",
help="output directory (default: %default)")
parser.add_option("-i", "--in-place", dest="IN_PLACE", default=False, action="store_true",
help="Overwrite input file rather than making input-chop.aida")
verbgroup = OptionGroup(parser, "Verbosity control")
verbgroup.add_option("-v", "--verbose", action="store_const",
const=logging.DEBUG, dest="LOGLEVEL",
help="print debug (very verbose) messages")
verbgroup.add_option("-q", "--quiet", action="store_const",
const=logging.WARNING, dest="LOGLEVEL",
help="be very quiet")
parser.set_defaults(bins=[],
outdir=".",
LOGLEVEL=logging.INFO)
opts, args = parser.parse_args()
## Configure logging
logging.basicConfig(level=opts.LOGLEVEL, format="%(message)s")
if len(args) == 0:
sys.stderr.write("Must specify at least one AIDA histogram file!\n")
sys.exit(1)
if len(opts.bins) == 0 and not opts.obsfile:
sys.stderr.write("No bins specified, so I'm doing nothing!\n")
sys.exit(1)
# Read in bin-definitions from file
if opts.obsfile:
bindefs = readObservableFile(opts.obsfile)
# If no file is given, try reading bin-definitions from CLOptions
else:
bindefs = {}
for bd in opts.bins:
try:
path, low, high = getBindef(bd)
bindefs[path] = (low, high)
except:
sys.stderr.write("Problem parsing bin definition `%s'" % (bd))
sys.exit(1)
for aidafile in args:
if not os.access(aidafile, os.R_OK):
logging.error("%s can not be read" % aidafile)
break
base, ext = os.path.splitext(os.path.basename(aidafile))
## Create output filename
base = args[0].split(".aida")[0]
if len(args) > 1:
outfile = args[1]
else:
if not opts.IN_PLACE:
base += "-chop"
outfile = base + ".aida"
chopfile = os.path.join(opts.outdir, outfile)
outhistos = []
tree = ET.parse(aidafile)
for dps in tree.findall("dataPointSet"):
thishist = lighthisto.Histo.fromDPS(dps)
if thishist.histopath in bindefs.keys():
outhistos.append(thishist.chop(bindefs[thishist.histopath]))
else:
outhistos.append(thishist)
out = open(chopfile, "w")
out.write('<?xml version="1.0" encoding="ISO-8859-1" ?>\n')
out.write('<!DOCTYPE aida SYSTEM "http://aida.freehep.org/schemas/3.3/aida.dtd">\n')
out.write('<aida version="3.3">\n')
out.write(' <implementation version="1.1" package="FreeHEP"/>\n')
out.write("\n\n".join([h.asAIDA() for h in sorted(outhistos)]) + "\n")
out.write("</aida>\n")
out.close()
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