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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 | Package: BSgenome
Title: Infrastructure for Biostrings-based genome data packages
Description: Infrastructure shared by all the Biostrings-based genome data
packages
Version: 1.32.0
Author: Herve Pages
Maintainer: H. Pages <hpages@fhcrc.org>
biocViews: Genetics, Infrastructure, DataRepresentation,
SequenceMatching, Annotation, SNP
Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.1.2), IRanges (>=
1.13.6), GenomicRanges (>= 1.15.9), Biostrings (>= 2.23.3)
Imports: methods, BiocGenerics, IRanges, GenomicRanges, XVector,
Biostrings, Rsamtools
Suggests: BiocInstaller, BSgenome.Celegans.UCSC.ce2 (>= 1.3.11),
BSgenome.Hsapiens.UCSC.hg19 (>= 1.3.11),
BSgenome.Hsapiens.UCSC.hg19.masked,
SNPlocs.Hsapiens.dbSNP.20100427, hgu95av2probe, Biobase,
GenomeInfoDb, RUnit
License: Artistic-2.0
LazyLoad: yes
Collate: utils.R OnDiskNamedSequences-class.R GenomeDescription-class.R
SNPlocs-class.R InjectSNPsHandler-class.R BSgenome-class.R
available.genomes.R injectSNPs.R getSeq-methods.R bsapply.R
BSgenome-utils.R GenomeData-class.R GenomeDataList-class.R
gdapply.R gdReduce.R BSgenomeForge.R
Packaged: 2014-04-12 05:30:00 UTC; biocbuild
Built: R 3.1.0; ; 2014-07-08 08:15:41 UTC; unix
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