openms-common 1.11.1-5 / usr / share / openms-common / OpenMS / MAPPING / mzdata-mapping.xml

This file is indexed.

/usr/share/openms-common/OpenMS/MAPPING/mzdata-mapping.xml is in openms-common 1.11.1-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below. 

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
<?xml version="1.0" encoding="UTF-8"?>
<CvMapping xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="http://www.psidev.info/files/validator/CvMapping.xsd" modelName="mzData.xsd" modelURI="" modelVersion="1.0.5">  <CvReferenceList>
    <CvReference cvName="mzData CV" cvIdentifier="PSI"/>
  </CvReferenceList>
  <CvMappingRuleList>
    <CvMappingRule id="0" cvElementPath="/mzData/description/admin/sampleDescription/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/description/admin/sampleDescription" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000001" useTermName="false" useTerm="true" termName="Sample Number" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000002" useTermName="false" useTerm="true" termName="Sample Name" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000003" useTermName="false" useTerm="true" termName="Sample State" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000004" useTermName="false" useTerm="true" termName="Sample Mass" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000005" useTermName="false" useTerm="true" termName="Sample Volume" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000006" useTermName="false" useTerm="true" termName="Sample Concentration" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000047" useTermName="false" useTerm="true" termName="Emulsion" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000048" useTermName="false" useTerm="true" termName="Gas" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000049" useTermName="false" useTerm="true" termName="Liquid" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000050" useTermName="false" useTerm="true" termName="Solid" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000051" useTermName="false" useTerm="true" termName="Solution" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000052" useTermName="false" useTerm="true" termName="Suspension" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000053" useTermName="false" useTerm="true" termName="Batch" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000054" useTermName="false" useTerm="true" termName="Chromatography" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="1" cvElementPath="/mzData/description/instrument/source/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/description/instrument/source" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000007" useTermName="false" useTerm="true" termName="Inlet Type" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000008" useTermName="false" useTerm="true" termName="Ionization Type" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000009" useTermName="false" useTerm="true" termName="Ionization Mode" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000055" useTermName="false" useTerm="true" termName="Continuous Flow Fast Atom Bombardment" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000056" useTermName="false" useTerm="true" termName="Direct" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000057" useTermName="false" useTerm="true" termName="Electrospray Inlet" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000058" useTermName="false" useTerm="true" termName="Flow Injection Analysis" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000059" useTermName="false" useTerm="true" termName="Inductively Coupled Plasma" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000060" useTermName="false" useTerm="true" termName="Infusion" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000061" useTermName="false" useTerm="true" termName="Jet Separator" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000062" useTermName="false" useTerm="true" termName="Membrane Separator" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000063" useTermName="false" useTerm="true" termName="Moving Belt" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000064" useTermName="false" useTerm="true" termName="Moving Wire" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000065" useTermName="false" useTerm="true" termName="Open Split" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000066" useTermName="false" useTerm="true" termName="Particle Beam" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000067" useTermName="false" useTerm="true" termName="Reservoir" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000068" useTermName="false" useTerm="true" termName="Septum" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000069" useTermName="false" useTerm="true" termName="Thermospray Inlet" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000070" useTermName="false" useTerm="true" termName="Atmospheric Pressure Chemical Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000071" useTermName="false" useTerm="true" termName="Chemical Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000072" useTermName="false" useTerm="true" termName="Electronic Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000073" useTermName="false" useTerm="true" termName="Electrospray Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000074" useTermName="false" useTerm="true" termName="Fast Atom Bombardment Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000075" useTermName="false" useTerm="true" termName="Matrix-assisted Laser Desorption Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000076" useTermName="false" useTerm="true" termName="Negative Ion Mode" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000077" useTermName="false" useTerm="true" termName="Positive Ion Mode" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000239" useTermName="false" useTerm="true" termName="Atmospheric Pressure Matrix-Assisted Laser Desorption Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000240" useTermName="false" useTerm="true" termName="Atmospheric Pressure Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000241" useTermName="false" useTerm="true" termName="Atmostpheric Pressure Photoionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000247" useTermName="false" useTerm="true" termName="Desorption Ionization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000248" useTermName="false" useTerm="true" termName="Direct Insertion Probe" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000249" useTermName="false" useTerm="true" termName="Direct Liquid Introduction" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="2" cvElementPath="/mzData/description/instrument/analyzerList/analyzer/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/description/instrument/analyzerList/analyzer" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000010" useTermName="false" useTerm="true" termName="Analyzer Type" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000011" useTermName="false" useTerm="true" termName="Mass Resolution" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000012" useTermName="false" useTerm="true" termName="Resolution Method" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000013" useTermName="false" useTerm="true" termName="Resolution Type" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000014" useTermName="false" useTerm="true" termName="Accuracy" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000015" useTermName="false" useTerm="true" termName="Scan Rate" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000016" useTermName="false" useTerm="true" termName="Scan Time" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000017" useTermName="false" useTerm="true" termName="Scan Function" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000018" useTermName="false" useTerm="true" termName="Scan Direction" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000019" useTermName="false" useTerm="true" termName="Scan Law" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000020" useTermName="false" useTerm="true" termName="Tandem Scanning Method" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000021" useTermName="false" useTerm="true" termName="Reflectron State" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000022" useTermName="false" useTerm="true" termName="TOF Total Path Length" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000023" useTermName="false" useTerm="true" termName="Isolation Width" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000024" useTermName="false" useTerm="true" termName="Final MS Exponent" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000025" useTermName="false" useTerm="true" termName="Magnetic Field Strength" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000078" useTermName="false" useTerm="true" termName="Axial Ejection Linear Ion Trap" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000079" useTermName="false" useTerm="true" termName="Fourier Transform Ion Cyclotron Resonance Mass Spectrometer" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000080" useTermName="false" useTerm="true" termName="Magnetic Sector" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000081" useTermName="false" useTerm="true" termName="Quadrupole" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000082" useTermName="false" useTerm="true" termName="Quadrupole Ion Trap" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000083" useTermName="false" useTerm="true" termName="Radial Ejection Linear Ion Trap" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000084" useTermName="false" useTerm="true" termName="Time-of-flight" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000085" useTermName="false" useTerm="true" termName="Baseline" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000086" useTermName="false" useTerm="true" termName="Full Width at Half-Maximum" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000087" useTermName="false" useTerm="true" termName="Ten Percent Valley" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000088" useTermName="false" useTerm="true" termName="Constant" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000089" useTermName="false" useTerm="true" termName="Proportional" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000090" useTermName="false" useTerm="true" termName="Mass Scan" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000091" useTermName="false" useTerm="true" termName="Selected Ion Detection" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000092" useTermName="false" useTerm="true" termName="Down" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000093" useTermName="false" useTerm="true" termName="Up" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000094" useTermName="false" useTerm="true" termName="Exponential" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000095" useTermName="false" useTerm="true" termName="Linear" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000096" useTermName="false" useTerm="true" termName="Quadratic" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000097" useTermName="false" useTerm="true" termName="Constant Neutral Mass Loss" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000098" useTermName="false" useTerm="true" termName="Multiple Ion Monitoring" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000099" useTermName="false" useTerm="true" termName="Multiple Reaction Monitoring" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000100" useTermName="false" useTerm="true" termName="Precursor Ion Scan" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000101" useTermName="false" useTerm="true" termName="Product Ion Scan" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000102" useTermName="false" useTerm="true" termName="Single Ion Monitoring" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000103" useTermName="false" useTerm="true" termName="Single Reaction Monitoring" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000104" useTermName="false" useTerm="true" termName="None" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000105" useTermName="false" useTerm="true" termName="Off" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000106" useTermName="false" useTerm="true" termName="On" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000206" useTermName="false" useTerm="true" termName="Selected Reaction Monitoring" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="3" cvElementPath="/mzData/description/instrument/detector/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/description/instrument/detector" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000026" useTermName="false" useTerm="true" termName="Detector Type" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000027" useTermName="false" useTerm="true" termName="Detector Acquisition Mode" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000028" useTermName="false" useTerm="true" termName="Detector Resolution" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000029" useTermName="false" useTerm="true" termName="Sampling Frequency" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000107" useTermName="false" useTerm="true" termName="Channeltron" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000108" useTermName="false" useTerm="true" termName="Conversion Dynode Electron Multiplier" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000109" useTermName="false" useTerm="true" termName="Conversion Dynode Photomultiplier" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000110" useTermName="false" useTerm="true" termName="Daly Detector" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000111" useTermName="false" useTerm="true" termName="Electron Multiplier Tube" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000112" useTermName="false" useTerm="true" termName="Faraday Cup" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000113" useTermName="false" useTerm="true" termName="Focal Plane Array" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000114" useTermName="false" useTerm="true" termName="Microchannel Plate Detector" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000115" useTermName="false" useTerm="true" termName="Multi-Collector" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000116" useTermName="false" useTerm="true" termName="Photomultiplier" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000117" useTermName="false" useTerm="true" termName="Analog-Digital Converter" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000118" useTermName="false" useTerm="true" termName="Pulse Counting" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000119" useTermName="false" useTerm="true" termName="Time-Digital Converter" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000120" useTermName="false" useTerm="true" termName="Transient Recorder" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000037" useTermName="false" useTerm="true" termName="Polarity Mode" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="4" cvElementPath="/mzData/description/instrument/additional/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/description/instrument/additional" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000030" useTermName="false" useTerm="true" termName="Vendor" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000031" useTermName="false" useTerm="true" termName="Model" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000032" useTermName="false" useTerm="true" termName="Customization" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="5" cvElementPath="/mzData/description/dataProcessing/processingMethod/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/description/dataProcessing/processingMethod" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000033" useTermName="false" useTerm="true" termName="Deisotoping" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000034" useTermName="false" useTerm="true" termName="Charge Deconvolution" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000035" useTermName="false" useTerm="true" termName="Peak Processing" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="6" cvElementPath="/mzData/spectrumList/spectrum/spectrumDesc/spectrumInstrument/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/spectrumList/spectrum/spectrumDesc/spectrumInstrument" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000037" useTermName="false" useTerm="true" termName="Polarity mode" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000038" useTermName="false" useTerm="true" termName="Time In Minutes" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000039" useTermName="false" useTerm="true" termName="Time In Seconds" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="7" cvElementPath="/mzData/spectrumList/spectrum/spectrumDesc/precursorList/precursor/ionSelection/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/spectrumList/spectrum/spectrumDesc/precursorList/precursor/ionSelection" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000040" useTermName="false" useTerm="true" termName="Mass To Charge Ratio" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000041" useTermName="false" useTerm="true" termName="Charge State" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000042" useTermName="false" useTerm="true" termName="Intensity" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000043" useTermName="false" useTerm="true" termName="Intensity Units" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
    <CvMappingRule id="8" cvElementPath="/mzData/spectrumList/spectrum/spectrumDesc/precursorList/precursor/activation/cvParam/@accession" requirementLevel="MAY"  scopePath="/mzData/spectrumList/spectrum/spectrumDesc/precursorList/precursor/activation" cvTermsCombinationLogic="OR">
      <CvTerm termAccession="PSI:1000044" useTermName="false" useTerm="true" termName="Method" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000045" useTermName="false" useTerm="true" termName="Collision Energy" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000046" useTermName="false" useTerm="true" termName="Energy Units" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000242" useTermName="false" useTerm="true" termName="Blackbody Infrared Radiative Dissociation" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000243" useTermName="false" useTerm="true" termName="Charge-Remote Fragmentation" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000244" useTermName="false" useTerm="true" termName="Consecutive Reaction Monitoring" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000245" useTermName="false" useTerm="true" termName="Charge Stripping" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000246" useTermName="false" useTerm="true" termName="Delayed Extraction" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
      <CvTerm termAccession="PSI:1000250" useTermName="false" useTerm="true" termName="Electron Capture Dissociation" isRepeatable="true" allowChildren="true" cvIdentifierRef="PSI" />
    </CvMappingRule>
  </CvMappingRuleList>
</CvMapping>

APT Browse - Built by Thomas Orozco.