/usr/share/logol/tools/logol.idx is in logol 1.7.0-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 | \indexentry{config/1|hyperpage}{1}
\indexentry{matchlist/2|hyperpage}{1}
\indexentry{matchstore/2|hyperpage}{2}
\indexentry{offset/1|hyperpage}{2}
\indexentry{outputfile/1|hyperpage}{2}
\indexentry{logolMain/5|hyperpage}{2}
\indexentry{isexact\_pos/4|hyperpage}{2}
\indexentry{isexactwithgapanderror\_pos/5|hyperpage}{2}
\indexentry{isexactwithgaponly\_pos/5|hyperpage}{3}
\indexentry{isexactwitherroronly\_pos/5|hyperpage}{3}
\indexentry{spacer\_withresult\_pos/5|hyperpage}{3}
\indexentry{wordSize\_pos/4|hyperpage}{3}
\indexentry{wordContent\_pos/4|hyperpage}{4}
\indexentry{checkPosition\_pos/4|hyperpage}{4}
\indexentry{anySpacer\_pos/7|hyperpage}{4}
\indexentry{testOverlap\_pos/5|hyperpage}{4}
\indexentry{cassiopee\_pos/14|hyperpage}{4}
\indexentry{getsuffixmatch\_pos/12|hyperpage}{5}
\indexentry{openSequenceStream/2|hyperpage}{5}
\indexentry{closeSequenceStream/0|hyperpage}{5}
\indexentry{getCharsFromPosition/3|hyperpage}{5}
\indexentry{getNChar/3|hyperpage}{6}
\indexentry{getWordContent/4|hyperpage}{6}
\indexentry{is4me/5|hyperpage}{6}
\indexentry{setSequence/2|hyperpage}{6}
\indexentry{anySpacer/5|hyperpage}{6}
\indexentry{getKnownVariables/2|hyperpage}{6}
\indexentry{resetParamList/3|hyperpage}{7}
\indexentry{any/2|hyperpage}{7}
\indexentry{isoverlap/5|hyperpage}{7}
\indexentry{morphism/3|hyperpage}{7}
\indexentry{suffixmatch/9|hyperpage}{7}
\indexentry{spacer\_withresult/5|hyperpage}{8}
\indexentry{isexact/3|hyperpage}{8}
\indexentry{isexact/4|hyperpage}{8}
\indexentry{isexact/5|hyperpage}{8}
\indexentry{isexactwithgaponly/5|hyperpage}{8}
\indexentry{isexactwithgapanderror/5|hyperpage}{9}
\indexentry{isexactwithgapanderror/4|hyperpage}{9}
\indexentry{isexactwitherroronly/4|hyperpage}{9}
\indexentry{isexactwitherroronly/4|hyperpage}{9}
\indexentry{iscompequal/2|hyperpage}{10}
\indexentry{getcomplement/2|hyperpage}{10}
\indexentry{getreversecomplement/2|hyperpage}{10}
\indexentry{applymorphism/4|hyperpage}{10}
\indexentry{checkCost/4|hyperpage}{10}
\indexentry{checkCost/5|hyperpage}{10}
\indexentry{cut\_sequence/3|hyperpage}{11}
\indexentry{wordSize/3|hyperpage}{11}
\indexentry{wordSize/4|hyperpage}{11}
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\indexentry{getContent/4|hyperpage}{12}
\indexentry{saveVariable/8|hyperpage}{12}
\indexentry{writeSequence/2|hyperpage}{13}
\indexentry{isequal/2|hyperpage}{13}
\indexentry{matrix/3|hyperpage}{13}
\indexentry{cost/4|hyperpage}{13}
\indexentry{computeCost/2|hyperpage}{13}
\indexentry{getDistance/3|hyperpage}{13}
\indexentry{getresult/2|hyperpage}{14}
\indexentry{writeallresult/2|hyperpage}{14}
\indexentry{initResultFile/1|hyperpage}{14}
\indexentry{closeResultFile/1|hyperpage}{14}
\indexentry{myCost/4|hyperpage}{14}
\indexentry{isexactwithdistinctgapanderror\_pos/7|hyperpage}{14}
\indexentry{logData/2|hyperpage}{15}
\indexentry{mapList/2|hyperpage}{15}
\indexentry{mapModels/2|hyperpage}{15}
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\indexentry{checkAlphabetPercentage/3|hyperpage}{18}
\indexentry{writeFinalMatches/0|hyperpage}{18}
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\indexentry{appendMatch/3|hyperpage}{18}
\indexentry{replaceMatch/4|hyperpage}{18}
\indexentry{isMin/5|hyperpage}{19}
\indexentry{getCounter/1|hyperpage}{19}
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