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       table   { margin-top: 0; margin-bottom: 0; vertical-align: top }
       h1      { text-align: center }
</style>
<title>MGD77LIST</title>

</head>
<body bgcolor="#ffffff">

<h1 align="center">MGD77LIST</h1>

<a href="#NAME">NAME</a><br>
<a href="#SYNOPSIS">SYNOPSIS</a><br>
<a href="#DESCRIPTION">DESCRIPTION</a><br>
<a href="#OPTIONS">OPTIONS</a><br>
<a href="#EXAMPLES">EXAMPLES</a><br>
<a href="#RECALCULATED ANOMALIES">RECALCULATED ANOMALIES</a><br>
<a href="#IGRF">IGRF</a><br>
<a href="#IGF">IGF</a><br>
<a href="#CORRECTIONS">CORRECTIONS</a><br>
<a href="#QUALITY CODES">QUALITY CODES</a><br>
<a href="#SEE ALSO">SEE ALSO</a><br>
<a href="#REFERENCES">REFERENCES</a><br>

<hr>


<h2>NAME
<a name="NAME"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">mgd77list
&minus; A data-extractor for MGD77[+] files</p>

<h2>SYNOPSIS
<a name="SYNOPSIS"></a>
</h2>



<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
<i>NGDC-ids</i>
<b>&minus;F</b><i>columns</i>[,<i>logic</i>][:<i>bittests</i>]
[
<b>&minus;A</b>[<b>+</b>]<b>c</b>|<b>d</b>|<b>f</b>|<b>m</b>|<b>t</b><i>code</i>
] [ <b>&minus;Cf</b>|<b>g</b>|<b>e</b> ] [
<b>&minus;DA</b>|<b>a</b><i>startdate</i> ] [
<b>&minus;DB</b>|<b>b</b><i>stopdate</i> ] [ <b>&minus;E</b>
] [ <b>&minus;Ga</b><i>startrec</i> ] [
<b>&minus;Gb</b><i>stoprec</i> ] [
<b>&minus;H</b>[<b>i</b>][<i>nrec</i>] ] [
<b>&minus;I</b><i>ignore</i> ] [
<b>&minus;L</b>[<i>corrtable</i>] ] [
<b>&minus;Nd</b>|<b>s</b><i>unit</i> ] [
<b>&minus;Qa</b>|<b>v</b><i>min</i>/<i>max</i> ] [
<b>&minus;R</b><i>west</i>/<i>east</i>/<i>south</i>/<i>north</i>[<b>r</b>]
] [ <b>&minus;Sa</b><i>startdist</i>[unit] ] [
<b>&minus;Sb</b><i>stopdist</i>[unit] ] [
<b>&minus;T</b>[<b>m</b>|<b>e</b>] ] [ <b>&minus;V</b> ] [
<b>&minus;W</b><i>weight</i> ] [
<b>&minus;Z</b><i>+</i>|<b>-</b> ] [
<b>&minus;bo</b>[<b>s</b>|<b>S</b>|<b>d</b>|<b>D</b>[<i>ncol</i>]|<b>c</b>[<i>var1</i><b>/</b><i>...</i>]]
] [ <b>&minus;m</b>[<i>flag</i>] ]</p>

<h2>DESCRIPTION
<a name="DESCRIPTION"></a>
</h2>



<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
reads &lt;NGDC-id&gt;.[mgd77|nc] files and produces an ASCII
[or binary] table. The &lt;NGDC-id&gt;.[mgd77|nc] files
contain track information such as leg-id, time and position,
geophysical observables such as gravity, magnetics, and
bathymetry, and control codes and corrections such as Eotvos
and diurnal corrections. The MGD77+ extended netCDF files
may also contain additional user columns (for a listing of
available columns, use <b>mgd77info &minus;C</b>, and to
learn how to add your own custom columns, see
<b><A HREF="mgd77manage.html">mgd77manage</A></b>). The user may extract any combination of
these parameters, any of six computed quantities (distance,
heading, velocity, Carter correction, and gravity and
magnetic global reference fields), calendar sub-units of
time (year, month, day, hour, min, sec), the NGDC id, and
finally a preset weight (see <b>&minus;W</b>). A sub-section
can be specified by passing time- or distance-intervals
along track or by selecting a geographical region. Finally,
each output record may be required to pass any number of
logical tests involving data values or bit flags. <i><br>
NGDC-ids</i></p>

<p style="margin-left:22%;">Can be one or more of five
kinds of specifiers: <br>
1) 8-character NGDC IDs, e.g., 01010083, JA010010etc., etc.
<br>
2) 2-character &lt;agency&gt; codes which will return all
cruises from each agency. <br>
3) 4-character &lt;agency&gt;&lt;vessel&gt; codes, which
will return all cruises from those vessels. <br>
4) =&lt;list&gt;, where &lt;list&gt; is a table with NGDC
IDs, one per line. <br>
5) If nothing is specified we return all cruises in the data
base. <br>
(See mgd77info <b>&minus;L</b> for agency and vessel codes).
The &quot;.mgd77&quot; or &quot;.nc&quot; extensions will
automatically be appended, if needed (use <b>&minus;I</b> to
ignore certain file types). Cruise files will be looked for
first in the current directory and second in all directories
listed in <b>$MGD77_HOME</b>/mgd77_paths.txt [If
<b>$MGD77_HOME</b> is not set it will default to
<b>$GMT_SHAREDIR</b>/mgd77].</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>&minus;F</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The required <i>columns</i> string must be a
comma-separated list of parameter abbreviations given in the
desired output order. Any parameters given in UPPER case
must not be NaN in a record for output to occur. Unless
specified separately, the output format (if ASCII) is
controlled by the GMT parameter <b><A HREF="gmtdefaults.html#D_FORMAT">D_FORMAT</A></b>. The
available abbreviations are:</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>drt</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The digital record type, usually 3 or 5 (for
Y2K-compliant cruises).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>id</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The survey ID string (leg name).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>tz</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The time zone adjustment (in hours from -13 to +12)</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>ngdcid</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The 8-character NGDC cruise ID string (usually the file
prefix).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>time</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Choose between Absolute calendar time (<b>atime</b>, the
default) in the format dictated by the GMT parameters
<b><A HREF="gmtdefaults.html#OUTPUT_DATE_FORMAT">OUTPUT_DATE_FORMAT</A></b> and <b><A HREF="gmtdefaults.html#OUTPUT_CLOCK_FORMAT">OUTPUT_CLOCK_FORMAT</A></b>,
Relative time (<b>rtime</b>) in the format dictated by the
GMT parameters <b><A HREF="gmtdefaults.html#D_FORMAT">D_FORMAT</A></b> and <b><A HREF="gmtdefaults.html#TIME_SYSTEM">TIME_SYSTEM</A></b> (or
<b><A HREF="gmtdefaults.html#TIME_EPOCH">TIME_EPOCH</A></b> and <b><A HREF="gmtdefaults.html#TIME_UNIT">TIME_UNIT</A></b>)), or Fractional year
(<b>ytime</b>) in the format dictated by
<b><A HREF="gmtdefaults.html#D_FORMAT">D_FORMAT</A></b>.</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>lon</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Longitude in the format dictated by the GMT parameter
<b><A HREF="gmtdefaults.html#OUTPUT_DEGREE_FORMAT">OUTPUT_DEGREE_FORMAT</A></b>.</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>lat</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Longitude in the format dictated by the GMT parameter
<b><A HREF="gmtdefaults.html#OUTPUT_DEGREE_FORMAT">OUTPUT_DEGREE_FORMAT</A></b>.</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>twt</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Two-Way Travel time (in s).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>depth</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Corrected bathymetry (in m, positive below
sealevel).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>mtf1</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Magnetic Total Field intensity from sensor 1 (in
nTesla).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>mtf2</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Magnetic Total Field intensity from sensor 2 (in
nTesla).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>mag</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Residual magnetic anomaly (in nTesla).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>gobs</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Observed gravity (in mGal).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>faa</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Free-air gravity anomaly (in mGal).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>ptc</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Position Type Code (1 = fix, 3 = interpolated, 9 =
unspecified).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>bcc</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Bathymetric Correction Code, indicating the procedure
used to convert travel time to depth. (01-55 =
Matthews&rsquo; zone used to correct the depth, 59 =
Matthews&rsquo; corrections used but the zones is
unspecified in the data record, 60 = S. Kuwahara formula for
T-S, 61 = Wilson formula for T-S, 62 = Del Grosso formula
for T-S, 63 = Carter&rsquo;s tables, 88 = Other, described
in header sections, 99 = unspecified).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>btc</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Bathymetric Type Code, indicating how the bathymetry
value was obtained (1 = observed, 3 = interpolated, 9 =
unspecified).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>msens</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Magnetic sensor for used to evaluate the residual field
(1 = 1st or leading sensor, 2 = 2nd or trailing sensor, 9 =
unspecified).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>msd</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Depth (or altitude) of the magnetic sensor (in m,
positive below sealevel).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>diur</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Magnetic diurnal correction (in nTesla).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>eot</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Eotvos correction (in mGal).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>sln</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Seismic Line Number string.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>sspn</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Seismic Shot Point Number string.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>nqc</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Navigation Quality Code (5 = suspected, by source
institution, 6 = suspected, by NGDC, 9 = no problems
identified).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>bqc</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Bathymetry Quality Code (1 = good, 2 = fair, 3 = poor, 4
= bad, 5 = bad, suspected by source institution, 6 = bad,
suspected by NGDC, 9 = not set).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>mqc</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Magnetics Quality Code (1 = good, 2 = fair, 3 = poor, 4
= bad, 5 = bad, suspected by source institution, 6 = bad,
suspected by NGDC, 9 = not set).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>gqc</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Gravity Quality Code (1 = good, 2 = fair, 3 = poor, 4 =
bad, 5 = bad, suspected by source institution, 6 = bad,
suspected by NGDC, 9 = not set).</p></td></tr>
</table>

<p style="margin-left:22%; margin-top: 1em">In addition,
the following derived quantities can be requested:</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p style="margin-top: 1em"><b>year</b></p></td>
<td width="2%"></td>
<td width="78%">


<p style="margin-top: 1em">The year of each record.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>month</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The month of each record.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>day</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The day of the month of each record.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>hour</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The hour of each record.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>min</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The minutes of each record.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>sec</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The decimal seconds of each record.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>date</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The date in yyyymmdd string format.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>hhmm</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The clock in hhmm.xxxx format (0-2359.xxxx).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>dmin</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>The decimal minutes of each record (0-59.xxxx).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>dist</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Along-track distance from start of leg. For method of
calculation, see <b>&minus;C</b> [spherical great circle
distances], and for distance units, see <b>&minus;N</b>
[km].</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>az</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Ship azimuth (heading) measured clockwise from north (in
degrees).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>vel</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Ship speed; see <b>&minus;N</b> for units [m/s].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>weight</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Weight assigned to this data set (see
<b>&minus;W</b>).</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>carter</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>Carter depth correction, if <b>twt</b> is present in
file (in m). Sign: Correction is to be subtracted from
uncorrected depths to yield a corrected depth.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>igrf</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>International geomagnetic reference field (total field)
(in nTesla).</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>ngrav</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>International Gravity reference Field (&quot;normal
gravity&quot;) (in mGal). Field is selected based on the
parameter Gravity Theoretical Formula Code in the
cruise&rsquo;s MGD77 header. If this is not set or is
invalid we default to the IGF 1980. Alternatively, specify
the field directly using <b>&minus;Af</b> (see that option
for more details).</p></td></tr>
</table>

<p style="margin-left:22%; margin-top: 1em">The following
short-hand flags are also recognized:</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p style="margin-top: 1em"><b>mgd77</b></p></td>
<td width="2%"></td>
<td width="78%">


<p style="margin-top: 1em">This results in all 27 MGD77
fields being written out in the official MGD77 order.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>mgd77t</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>This results in all 26 MGD77T fields being written out
in the official MGD77T order.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>all</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>as mgd77 or mgd77t but time is written as a single
date-time string.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="9%">


<p><b>geo</b></p></td>
<td width="2%"></td>
<td width="78%">


<p>This limits the output to 10 fields (<b>time</b>,
<b>lon</b>, <b>lat</b> plus the seven geophysical
observations <b>twt</b>, <b>depth</b>, <b>mtf1</b>,
<b>mtf2</b>, <b>mag</b>, <b>gobs</b>, and <b>faa</b>). By
appending <b>+</b> to either of these set we will also
append <b>dist</b>, <b>azim</b>, <b>vel</b>, and
<b>weight</b> as listed above.</p></td></tr>
</table>

<p style="margin-left:22%; margin-top: 1em">As an option,
logical tests may be added for any of the observations by
appending ,<i>logic</i>, which is itself composed of one or
more comma-separated instructions of the form
<i>par</i><b>OP</b><i>value</i>, where <i>par</i> is one of
the parameters listed above, <b>OP</b> is a logical operator
(&lt;, &lt;=, =, !=, &gt;=, &gt;, |), and <i>value</i> is a
constant used in the comparison. Floating point parameters
are compared numerically; character parameters are compared
lexically (after leading and trailing blanks have been
removed). The bit comparison (|) means that at least one of
the bits in <i>value</i> must be turned on in <i>par</i>. At
least one of the tests must be true for the record to be
output, except for tests using UPPER case parameters which
all must be true for output to occur. Note that specifying a
test does not imply that the corresponding column will be
included in the output stream; it must be present in
<i>columns</i> for that to occur. Note: some of the
operators are special UNIX characters and you are advised to
place quotes around the entire argument to
<b>&minus;F</b>.</p>

<p style="margin-left:22%; margin-top: 1em">Finally, for
MGD77+ files you may optionally append :<i>bittests</i>
which is : (a colon) followed by one or more comma-separated
+-<i>col</i> terms. This compares specific bitflags only for
each listed column. Here, + means the chosen bit must be 1
(ON) whereas - means it must be 0 (OFF). All bit tests given
must be passed. By default, MGD77+ files that have the
special <b>MGD77_flags</b> column present will use those
flags, and observations associated with ON-bits (meaning
they are flagged as bad) will be set to NaN; append : with
no trailing information to turn this behavior off (i.e., no
bit flags will be consulted).</p>

<h2>OPTIONS
<a name="OPTIONS"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">No space
between the option flag and the associated arguments.</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p style="margin-top: 1em"><b>&minus;A</b></p></td>
<td width="7%"></td>
<td width="78%">


<p style="margin-top: 1em">By default, corrected depth
(<b>depth</b>), magnetic residual anomaly (<b>mag</b>),
free-air gravity anomaly (<b>faa</b>), and the derived
quantity Carter depth correction (<b>carter</b>) are all
output as is (if selected in <b>&minus;F</b>); this option
adjusts that behavior. For each of these columns there are
2&minus;4 ways to adjust the data. Append <b>c</b>(arter),
<b>d</b>(epth), <b>f</b>(aa), or <b>m</b>(ag) and select the
<i>code</i> for the procedure you want applied. You may
select more than one procedure for a data column by summing
their numerical <i>code</i>s (1, 2, 4, and 8). E.g.,
<b>&minus;Ac</b> 3 will first try method <b>&minus;Ac</b> 1
to estimate a Carter correction but if <b>depth</b> is NaN
we will next try <b>&minus;Ac</b> 2 which only uses
<b>twt</b>. In all cases, if any of the values required by
an adjustment procedure is NaN then the result will be NaN.
This is also true if the original anomaly is NaN. Specify
<b>&minus;A+</b> to recalculate anomalies even if the
anomaly in the file is NaN. Additionally, you can use
<b>&minus;At</b> to create fake times for cruises that has
no time; these are based on distances and cruise
duration.</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Ac</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Determines how the <b>carter</b> correction term is
calculated. Below, C(<b>twt</b>) stands for the
Carter-corrected depth (it also depends on <b>lon</b>,
<b>lat</b>), U(<b>twt</b>, <i>v</i>) is the uncorrected
depth (= <b>twt</b> * <i>v</i> / 2) using as <i>v</i> the
&quot;Assumed Sound Velocity&quot; parameter in the MGD77
header (if it is a valid velocity, otherwise we default to
1500 m/s); alternatively, append your preferred velocity
<i>v</i> in m/s, TU(<b>depth</b>, <i>v</i>) is the 2-way
travel time estimated from the (presumably) uncorrected
<b>depth</b>, and TC(<b>depth</b>) is the 2-way travel time
obtained by inverting the (presumably) corrected
<b>depth</b> using the Carter correction formula. Select
from</p> </td></tr>
</table>

<p style="margin-left:22%;"><b>&minus;Ac1</b>[,<i>v</i>]
returns difference between U(<b>twt</b>, <i>v</i>) and
<b>depth</b> [Default]. <b><br>
&minus;Ac2</b>[,<i>v</i>] returns difference between
U(<b>twt</b>, <i>v</i>) and Carter (<b>twt</b>). <b><br>
&minus;Ac4</b>[,<i>v</i>] returns difference between
(assumed uncorrected) <b>depth</b> and Carter
(TU(<b>depth</b>)). <b><br>
&minus;Ac8</b>[,<i>v</i>] returns difference between
U(TC(<b>depth</b>), <i>v</i>) and <b>depth</b>.</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p style="margin-top: 1em"><b>&minus;Ad</b></p></td>
<td width="7%"></td>
<td width="78%">


<p style="margin-top: 1em">Determines how the <b>depth</b>
column output is obtained:</p></td></tr>
</table>

<p style="margin-left:22%;"><b>&minus;Ad1</b> returns
<b>depth</b> as stored in the data set [Default]. <b><br>
&minus;Ad2</b>[,<i>v</i>] returns calculated uncorrected
depth U(<b>twt</b>, <i>v</i>). <b><br>
&minus;Ad4</b> returns calculated corrected depth
C(<b>twt</b>).</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p style="margin-top: 1em"><b>&minus;Af</b></p></td>
<td width="7%"></td>
<td width="78%">


<p style="margin-top: 1em">Determines how the <b>faa</b>
column output is obtained. If <b>ngrav</b> (i.e., the
International Gravity reference Field (IGF), or &quot;normal
gravity&quot;) is required it is selected based on the MGD77
header parameter &quot;Theoretical Gravity Formula
Code&quot;; if this code is not present or is invalid we
default to 4. Alternatively, append the preferred
<i>field</i> (1&minus;4) to select 1 (Heiskanen 1924), 2
(IGF 1930), 3 (IGF 1967) or 4 (IGF 1980). Select from</p></td></tr>
</table>


<p style="margin-left:22%;"><b>&minus;Af1</b>[,<i>field</i>]
returns <b>faa</b> as stored in the data set [Default].
Optionally, sets the IGF <i>field</i> to use if you also
have requested <b>ngrav</b> as an output column in
<b>&minus;F</b>. <b><br>
&minus;Af2</b>[,<i>field</i>] returns the difference between
<b>gobs</b> and <b>ngrav</b> (with optional <i>field</i>
directive). <b><br>
&minus;Af3</b>[,<i>field</i>] returns the combination of
<b>gobs</b> + <b>eot</b> - <b>ngrav</b> (with optional
<i>field</i> directive).</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p style="margin-top: 1em"><b>&minus;Am</b></p></td>
<td width="7%"></td>
<td width="78%">


<p style="margin-top: 1em">Determines how the <b>mag</b>
column output is obtained. There may be one or two total
field measurements in the file (<b>mtf1</b> and
<b>mtf2</b>), and the column <b>msens</b> may state which
one is the leading sensor (1 or 2; it may also be
undefined). Select from</p></td></tr>
</table>

<p style="margin-left:22%;"><b>&minus;Am1</b> returns
<b>mag</b> as stored in the data set [Default]. <b><br>
&minus;Am2</b> returns the difference between <b>mgfx</b>
and <b>igrf</b>, where <b>x</b> is the leading sensor
(<b>1</b> or <b>2</b>) indicated by the <b>msens</b> data
field (defaults to <b>1</b> if unspecified). <b><br>
&minus;Am4</b> returns the difference between <b>mgfx</b>
and <b>igrf</b>, where <b>x</b> is the sensor (<b>2</b> or
<b>1</b>) <i>not</i> indicated by the <b>msens</b> data
field (defaults to <b>2</b> if unspecified).</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="3%">


<p style="margin-top: 1em"><b>&minus;C</b></p></td>
<td width="8%"></td>
<td width="78%">


<p style="margin-top: 1em">Append a one-letter code to
select the procedure for along-track distance calculation
(see <b>&minus;N</b> for selecting units):</p></td></tr>
</table>

<p style="margin-left:22%;"><b>f</b> Flat Earth distances.
<b><br>
g</b> Great circle distances [Default]. <b><br>
e</b> Geodesic distances on current GMT ellipsoid.</p>

<table width="100%" border="0" rules="none" frame="void"
       cellspacing="0" cellpadding="0">
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p style="margin-top: 1em"><b>&minus;Da</b></p></td>
<td width="7%"></td>
<td width="78%">


<p style="margin-top: 1em">Do not list data collected
before <i>startdate</i> (yyyy-mm-dd<b>T</b>[hh:mm:ss])
[Default is start of cruise]. Use <b>&minus;DA</b> to
exclude records whose time is undefined (i.e., NaN).
[Default reports those records].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Db</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Do not list data collected on or after <i>stopdate</i>
(yyyy-mm-dd<b>T</b>[hh:mm:ss]). [Default is end of cruise].
Use <b>&minus;DB</b> to exclude records whose time is
undefined (i.e., NaN). [Default reports those records].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;E</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Exact match: Only output records that match all the
requested geophysical columns [Default outputs records that
matches at least one of the observed columns].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Ga</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Do not list records before <i>startrec</i> [Default is
0, the first record].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Gb</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Do not list data after <i>stoprec</i>. [Default is the
last record].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;H</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Issue a header record with names for each data
field.</p> </td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;I</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Ignore certain data file formats from consideration.
Append <b>a|c|m|t</b> to ignore MGD77 ASCII, MGD77+ netCDF,
MGD77T ASCII or plain tab-separated ASCII table files,
respectively. The option may be repeated to ignore more than
one format. [Default ignores none].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;L</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Apply optimal corrections to columns where such
corrections are available. Append the correction table to
use [Default uses the correction table mgd77_corrections.txt
in the <b>$MGD77_HOME</b> directory]. For the format of this
file, see CORRECTIONS below.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;N</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Append <b>d</b> for distance or <b>s</b> for speed, then
give the desired <i>unit</i> as <b>e</b> (meter or m/s),
<b>k</b> (km or km/hr), <b>m</b> (miles or miles/hr), or
<b>n</b> (nautical miles or knots). [Default is
<b>&minus;Ndk &minus;Nse</b> (km and m/s)].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Qa</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Specify an accepted range (<i>min</i>/<i>max</i>) of
azimuths. Records whose track azimuth falls outside this
range are ignored [0-360].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Qv</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Specify an accepted range (<i>min</i>/<i>max</i>; or
just <i>min</i> if there is no upper limit) of velocities.
Records whose track speed falls outside this range are
ignored [0-infinity].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;R</b></p></td>
<td width="7%"></td>
<td width="78%">


<p><i>west, east, south,</i> and <i>north</i> specify the
Region of interest, and you may specify them in decimal
degrees or in [+-]dd:mm[:ss.xxx][W|E|S|N] format. Append
<b>r</b> if lower left and upper right map coordinates are
given instead of w/e/s/n. The two shorthands
<b>&minus;Rg</b> and <b>&minus;Rd</b> stand for global
domain (0/360 and -180/+180 in longitude respectively, with
-90/+90 in latitude). Alternatively, specify the name of an
existing grid file and the <b>&minus;R</b> settings (and
grid spacing, if applicable) are copied from the grid.</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Sa</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Do not list data that are less than <i>startdist</i>
meter along track from port of departure. Append <b>k</b>
for km, <b>m</b> for miles, or <b>n</b> for nautical miles
[Default is 0 meters].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Sb</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Do not list data that are <i>stopdist</i> or more meters
along track from port of departure. Append <b>k</b> for km,
<b>m</b> for miles, or <b>n</b> for nautical miles [Default
is end of track].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;T</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Turns OFF the otherwise automatic adjustment of values
based on correction terms that are stored in the MGD77+ file
and used to counteract such things as wrong units used by
the source institution when creating the original MGD77 file
from which the MGD77+ file derives (the option has no effect
on plain MGD77 ASCII files). Append <b>m</b> or <b>e</b> to
limit the option to the MGD77 or extended columns set only
[Default applies to both].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;V</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Selects verbose mode, which will send progress reports
to stderr [Default runs &quot;silently&quot;].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;W</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Set the weight for these data. Weight output option must
be set in <b>&minus;F</b>. This is useful if the data are to
be processed with the weighted averaging techniques offered
by <b><A HREF="blockmean.html">blockmean</A></b>, <b><A HREF="blockmedian.html">blockmedian</A></b>, and
<b><A HREF="blockmode.html">blockmode</A></b> [1].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;Z</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Append the sign you want for <b>depth</b>,
<b>carter</b>, and <b>msd</b> values below sea level
(<b>&minus;Z-</b> gives negative bathymetry) [Default is
positive down].</p></td></tr>
<tr valign="top" align="left">
<td width="11%"></td>
<td width="4%">


<p><b>&minus;bo</b></p></td>
<td width="7%"></td>
<td width="78%">


<p>Selects binary output mode (single precision; append
<b>d</b> for double precision, or use <b>S</b>|<b>D</b> to
swap bytes on output) [Default is ASCII]. <b>&minus;H</b> is
ignored if <b>&minus;bo</b> is selected. Likewise,
string-fields cannot be selected. Note that if time is one
of the binary output columns it will be stored as Unix-time
(seconds since 1970). To read this information in GMT to
obtain absolute calendar time will require you to use
--TIME_SYSTEM=unix.</p> </td></tr>
</table>


<p style="margin-left:11%;"><b>&minus;m</b>[<i>flag</i>]</p>

<p style="margin-left:22%;">Issue a multi-segment header
record with cruise ID for each cruise.</p>

<h2>EXAMPLES
<a name="EXAMPLES"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">To get a
(distance, heading, gravity, bathymetry) listing from
01010047.mgd77, starting at June 3 1971 20:45 and ending at
distance = 5000 km, use the following command:</p>


<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
01010047 <b>&minus;Da</b> 1971-06-03T20:45 <b>&minus;Sb</b>
5000 <b>&minus;F</b> dist,azim,faa,depth &gt; myfile.d</p>

<p style="margin-left:11%; margin-top: 1em">To make input
for <b><A HREF="blockmean.html">blockmean</A></b> and <b><A HREF="surface.html">surface</A></b> using free-air
anomalies from all the cruises listed in the file
cruises.lis, but only the data that are inside the specified
area, and make the output binary:</p>


<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
&lsquo;cat cruises.lis&lsquo; <b>&minus;F</b> lon,lat,faa
<b>&minus;R</b>-40/-30/25/35 <b>&minus;bo</b> &gt;
allgrav.b</p>

<p style="margin-left:11%; margin-top: 1em">To extract the
locations of depths exceeding 9000 meter that were not
interpolated (<b>btc</b> != 1) from all the cruises listed
in the file cruises.lis:</p>


<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
&lsquo;cat cruises.lis&lsquo;
<b>&minus;F</b>&quot;depth,DEPTH&gt;9000,BTC!=1&quot; &gt;
really_deep.d</p>

<p style="margin-left:11%; margin-top: 1em">To extract
dist, faa, and grav12_2 from records whose depths are
shallower than 3 km and where none of the requested fields
are NaN, from all the MGD77+ netCDF files whose cruise ids
are listed in the file cruises.lis, we try</p>


<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
&lsquo;cat cruises.lis&lsquo; <b>&minus;E &minus;Ia
&minus;F</b>&quot;dist,faa,grav12_2,depth&lt;3000&quot; &gt;
shallow_grav.d</p>

<p style="margin-left:11%; margin-top: 1em">To extract
dist, faa, and grav12_2 from all the MGD77+ netCDF files
whose cruise ids are listed in the file cruises.lis, but
only retrieve records whose bitflag for faa indicates BAD
values, we try</p>


<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
&lsquo;cat cruises.lis&lsquo; <b>&minus;E &minus;Ia
&minus;F</b>&quot;dist,faa,grav12_2:+faa&quot; &gt;
bad_grav.d</p>

<p style="margin-left:11%; margin-top: 1em">To output lon,
lat, mag, and faa from all the cruises listed in the file
cruises.lis, but recalculate the two residuals based on the
latest reference fields, try:</p>


<p style="margin-left:11%; margin-top: 1em"><b>mgd77list</b>
&lsquo;cat cruises.lis&lsquo; <b>&minus;F</b>
lon,lat,mag,faa <b>&minus;Af</b> 2,4 <b>&minus;Am</b> 2 &gt;
data.d</p>

<h2>RECALCULATED ANOMALIES
<a name="RECALCULATED ANOMALIES"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">When
recalculated anomalies are requested (either explicitly via
the <b>&minus;A</b> option or implicitly via E77 metadata in
the MGD77+ file) we only do so for the records whose
original anomaly was not a NaN. This restriction is
implemented since many anomaly columns contains corrections,
usually in the form of hand-edited changes, that cannot be
duplicated from the corresponding observation.</p>

<h2>IGRF
<a name="IGRF"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">The IGRF
calculations are based on a Fortran program written by Susan
Macmillan, British Geological Survey, translated to C via
f2c by Joaquim Luis, U Algarve, and adapted to GMT-style by
Paul Wessel.</p>

<h2>IGF
<a name="IGF"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">The equations
used are reproduced here using coefficients extracted
directly from the source code (let us know if you find
errors): <br>
(1) g = 978052.0 * [1 + 0.005285 * sin^2(lat) - 7e-6 *
sin^2(2*lat) + 27e-6 * cos^2(lat) * cos^2(lon-18)] <br>
(2) g = 978049.0 * [1 + 0.0052884 * sin^2(lat) - 0.0000059 *
sin^2(2*lat)] <br>
(3) g = 978031.846 * [1 + 0.0053024 * sin^2(lat) - 0.0000058
* sin^2(2*lat)] <br>
(4) g = 978032.67714 * [(1 + 0.00193185138639 * sin^2(lat))
/ sqrt (1 - 0.00669437999013 * sin^2(lat))]</p>

<h2>CORRECTIONS
<a name="CORRECTIONS"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">The correction
table is an ASCII file with coefficients and parameters
needed to carry out corrections. Comment records beginning
with # are allowed. All correction records are of the
form</p>

<p style="margin-left:11%; margin-top: 1em"><i>cruiseID
observation correction</i></p>

<p style="margin-left:11%; margin-top: 1em">where
<i>cruiseID</i> is a NGDC prefix, <i>observation</i> is one
of the abbreviations for geophysical observations listed
under <b>&minus;F</b> above, and <i>correction</i> consists
of one or more <i>term</i>s that will be summed up and then
<b>subtracted</b> from the observation before output. Each
<i>term</i> must have this exact syntax:</p>


<p style="margin-left:11%; margin-top: 1em"><i>factor</i>[*[<i>function</i>]([<i>scale</i>](<i>abbrev</i>[-<i>origin</i>]))[^<i>power</i>]]</p>

<p style="margin-left:11%; margin-top: 1em">where terms in
brackets are optional (the brackets themselves are not used
but regular parentheses must be used as indicated). No
spaces are allowed except between <i>term</i>s. The
<i>factor</i> is the amplitude of the basis function, while
the optional <i>function</i> can be one of sin, cos, or exp.
The optional <i>scale</i> and <i>origin</i> can be used to
translate the argument (before giving it to the optional
function). The argument <i>abbrev</i> is one of the
abbreviations for observations listed above. If
<i>origin</i> is given as <b>T</b> it means that we should
replace it with the value of <i>abbrev</i> for the very
first record in the file (this is usually only done for
<i>time</i>). If the first record entry is NaN we revert
<i>origin</i> to zero. Optionally, raise the entire
expression to the given <i>power</i>, before multiplying by
the amplitude. The following is an example of fictitious
corrections to the cruise 99999999, implying the
<b>depth</b> should have the Carter correction removed,
<b>faa</b> should have a linear trend removed, the magnetic
anomaly (<b>mag</b>) should be corrected by a strange
dependency on ship heading and latitude, and <b>gob</b>s
needs to have 10 mGal added (hence given as -10):</p>

<p style="margin-left:11%; margin-top: 1em">99999999 depth
1.0*((carter)) <br>
99999999 faa 14.1 1e-5*((time-T)) <br>
99999999 mag 0.5*cos(0.5*(azim-19))^2
1.0*exp(-1e-3(lat))^1.5 <br>
99999999 gobs -10</p>

<h2>QUALITY CODES
<a name="QUALITY CODES"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">The MGD77T
format added three quality codes for bathymetry
(<b>bqc</b>), magnetics (<b>mqc</b>), and gravity
(<b>gqc</b>). They are not present in the original MGD77
format, and if requested will return 9 or NULL.</p>

<h2>SEE ALSO
<a name="SEE ALSO"></a>
</h2>



<p style="margin-left:11%; margin-top: 1em"><i><A HREF="mgd77convert.html">mgd77convert</A></i>(1),
<i><A HREF="mgd77info.html">mgd77info</A></i>(1), <i><A HREF="mgd77manage.html">mgd77manage</A></i>(1),
<i><A HREF="mgd77track.html">mgd77track</A></i>(1)</p>

<h2>REFERENCES
<a name="REFERENCES"></a>
</h2>


<p style="margin-left:11%; margin-top: 1em">Wessel, P., and
W. H. F. Smith, 2014, The Generic Mapping Tools (GMT)
version 4.5.12 Technical Reference &amp; Cookbook,
SOEST/NOAA. <br>
Wessel, P., and W. H. F. Smith, 1998, New, Improved Version
of Generic Mapping Tools Released, EOS Trans., AGU, 79 (47),
p. 579. <br>
Wessel, P., and W. H. F. Smith, 1995, New Version of the
Generic Mapping Tools Released, EOS Trans., AGU, 76 (33), p.
329. <br>
Wessel, P., and W. H. F. Smith, 1995, New Version of the
Generic Mapping Tools Released,
http://www.agu.org/eos_elec/95154e.html, Copyright 1995 by
the American Geophysical Union. <br>
Wessel, P., and W. H. F. Smith, 1991, Free Software Helps
Map and Display Data, EOS Trans., AGU, 72 (41), p. 441. <br>
The Marine Geophysical Data Exchange Format -
&quot;MGD77&quot;, see
<i>http://www.ngdc.noaa.gov/mgg/dat/geodas/docs/mgd77.txt</i>
<br>
IGRF, see
<i>http://www.ngdc.noaa.gov/IAGA/vmod/igrf.html</i></p>
<hr>
</body>
</html>